Gene
RNA
| Item | Value |
|---|---|
| gene id | G377294 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21152414 ~ 21153105 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428849 | True | 308 | lncRNA | 0.50 | 2 | 21152414 | 21153105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522819 | LOC106568526 | coding | upstream | 53125 | 21050936 ~ 21099289 (+) |
| LOC110523398 | LOC100534606 | coding | upstream | 161038 | 20952149 ~ 20991376 (+) |
| ccar2 | LOC106568504 | coding | upstream | 208371 | 20923014 ~ 20944043 (+) |
| LOC110523395 | LOC106568500 | coding | upstream | 241777 | 20898121 ~ 20910637 (+) |
| LOC110522818 | LOC106568484 | coding | upstream | 254547 | 20881938 ~ 20897867 (+) |
| npm2b | LOC106592477 | coding | downstream | 124463 | 21277568 ~ 21288531 (+) |
| LOC110523406 | crybb1 | coding | downstream | 320748 | 21473853 ~ 21477171 (+) |
| LOC110523407 | LOC106568363 | coding | downstream | 325580 | 21478685 ~ 21493435 (+) |
| LOC110523409 | LOC106565015 | coding | downstream | 365452 | 21518557 ~ 21521828 (+) |
| LOC110523408 | LOC106565015 | coding | downstream | 374450 | 21527555 ~ 21534161 (+) |
| G377293 | NA | non-coding | upstream | 424 | 21147331 ~ 21151990 (+) |
| G377292 | NA | non-coding | upstream | 26873 | 21112894 ~ 21125541 (+) |
| G377255 | NA | non-coding | upstream | 49314 | 21100331 ~ 21103100 (+) |
| G377272 | NA | non-coding | upstream | 80832 | 21071374 ~ 21071582 (+) |
| G377261 | NA | non-coding | upstream | 108418 | 21043689 ~ 21043996 (+) |
| LOC110523400 | LOC106568542 | non-coding | downstream | 6026 | 21108129 ~ 21160149 (+) |
| G377299 | NA | non-coding | downstream | 7694 | 21160799 ~ 21161204 (+) |
| G377301 | NA | non-coding | downstream | 9349 | 21162454 ~ 21162971 (+) |
| G377303 | NA | non-coding | downstream | 12024 | 21165129 ~ 21165486 (+) |
| G377322 | NA | non-coding | downstream | 50217 | 21203322 ~ 21203616 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 315855 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 393913 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 555551 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1168566 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 3069049 | 18067350 ~ 18177035 (+) |
| G378660 | NA | other | downstream | 1019430 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1350647 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1449005 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1789187 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 2470859 | 23623921 ~ 23678038 (+) |
