G377301


Basic Information

Item Value
gene id G377301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21162454 ~ 21162971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428856
cccacaggtgctctcatttgttgacttctgtaaacgtaaaagctttggtttcatgcatgttaacattagaagcctactccctaaatttgttttactcactgctttagcacactctgccaacccagatgtcttagccgtgtctgaatcctggcttaggaaaaccaccaaaaaccttgatttccattcctaactataatgttttccgccaagatagaactgccaaagggggcggcgttgcaatctactgcaaagatagtaatacagaactctgcaggctatctaagtctgtacccaaacaatttgagcttctacttctaaaaattcacctttccagaaacaagtctctcactgttgccgcttgctatagacctccctctgcccccagctgtgccctcgataccatatgtgaattgattgccccccatctatcttctgagctcgtgctactaggtgacctaaactgggacatgcttaacaccccggccatcctacaaactaagcttgatgccctcaatttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428856 True 518 lncRNA 0.45 1 21162454 21162971

Neighbor

gene id symbol gene type direction distance location
LOC110523400 LOC106568542 coding upstream 2314 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 63165 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 171078 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 218411 20923014 ~ 20944043 (+)
LOC110523395 LOC106568500 coding upstream 251817 20898121 ~ 20910637 (+)
npm2b LOC106592477 coding downstream 114597 21277568 ~ 21288531 (+)
LOC110523406 crybb1 coding downstream 310882 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 315714 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 355586 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 364584 21527555 ~ 21534161 (+)
G377299 NA non-coding upstream 1250 21160799 ~ 21161204 (+)
G377294 NA non-coding upstream 9349 21152414 ~ 21153105 (+)
G377293 NA non-coding upstream 10464 21147331 ~ 21151990 (+)
G377292 NA non-coding upstream 36913 21112894 ~ 21125541 (+)
G377303 NA non-coding downstream 2158 21165129 ~ 21165486 (+)
G377322 NA non-coding downstream 40351 21203322 ~ 21203616 (+)
G377356 NA non-coding downstream 130431 21293402 ~ 21294594 (+)
G377360 NA non-coding downstream 142691 21305662 ~ 21306274 (+)
G377371 NA non-coding downstream 151670 21314641 ~ 21315084 (+)
LOC110522817 LOC106568462 other upstream 325895 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 403953 20508074 ~ 20759255 (+)
G377022 NA other upstream 565591 20591480 ~ 20596863 (+)
G376320 NA other upstream 1178606 19983261 ~ 19983848 (+)
G378660 NA other downstream 1009564 22172535 ~ 22231920 (+)
G378832 NA other downstream 1340781 22503752 ~ 22506270 (+)
G378868 NA other downstream 1439139 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1779321 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2460993 23623921 ~ 23678038 (+)

Expression


Co-expression Network