G377303


Basic Information

Item Value
gene id G377303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21165129 ~ 21165486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428858
aagccaattcctcctttggtcgtctttccttacagttctctgctgcccatgactgaattgaattgcaaaaatctctgaagctggactcacatctccctcactagctttaagcaccagctgtcagagcagcttacagatcactgcacctgtacatagcccgtctgtaaacagcccatctatctacctacctcatccccatactggtatttattttgctcctttgcaccccagtatctctacctgcacattcatcttctgccgatctaccattccagtgtttaattgctataatgcaattacttcgccaccatggcctatttatttccttaacttacctcatttgcactcactgtatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428858 True 358 lncRNA 0.44 1 21165129 21165486

Neighbor

gene id symbol gene type direction distance location
LOC110523400 LOC106568542 coding upstream 4989 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 65840 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 173753 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 221086 20923014 ~ 20944043 (+)
LOC110523395 LOC106568500 coding upstream 254492 20898121 ~ 20910637 (+)
npm2b LOC106592477 coding downstream 112082 21277568 ~ 21288531 (+)
LOC110523406 crybb1 coding downstream 308367 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 313199 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 353071 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 362069 21527555 ~ 21534161 (+)
G377301 NA non-coding upstream 2158 21162454 ~ 21162971 (+)
G377299 NA non-coding upstream 3925 21160799 ~ 21161204 (+)
G377294 NA non-coding upstream 12024 21152414 ~ 21153105 (+)
G377293 NA non-coding upstream 13139 21147331 ~ 21151990 (+)
G377322 NA non-coding downstream 37836 21203322 ~ 21203616 (+)
G377356 NA non-coding downstream 127916 21293402 ~ 21294594 (+)
G377360 NA non-coding downstream 140176 21305662 ~ 21306274 (+)
G377371 NA non-coding downstream 149155 21314641 ~ 21315084 (+)
G377363 NA non-coding downstream 150191 21315677 ~ 21415826 (+)
LOC110522817 LOC106568462 other upstream 328570 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 406628 20508074 ~ 20759255 (+)
G377022 NA other upstream 568266 20591480 ~ 20596863 (+)
G376320 NA other upstream 1181281 19983261 ~ 19983848 (+)
G378660 NA other downstream 1007049 22172535 ~ 22231920 (+)
G378832 NA other downstream 1338266 22503752 ~ 22506270 (+)
G378868 NA other downstream 1436624 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1776806 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2458478 23623921 ~ 23678038 (+)

Expression


Co-expression Network