G377322


Basic Information

Item Value
gene id G377322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21203322 ~ 21203616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428879
acagcacagcactactagaccaggcccaacacagcacatatTTACCAGACCAGACCCGCCTCAGGACAGCACAACTAGACccgtcccatcacaacacagctctactagacctggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacctggcccatcacaacacagctctaccagaccagac

Function

NR:

description
chromosome alignment-maintaining phosphoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428879 True 265 lncRNA 0.55 2 21203322 21203616

Neighbor

gene id symbol gene type direction distance location
LOC110523400 LOC106568542 coding upstream 43182 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 104033 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 211946 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 259279 20923014 ~ 20944043 (+)
LOC110523395 LOC106568500 coding upstream 292685 20898121 ~ 20910637 (+)
npm2b LOC106592477 coding downstream 73952 21277568 ~ 21288531 (+)
LOC110523406 crybb1 coding downstream 270237 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 275069 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 314941 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 323939 21527555 ~ 21534161 (+)
G377303 NA non-coding upstream 37836 21165129 ~ 21165486 (+)
G377301 NA non-coding upstream 40351 21162454 ~ 21162971 (+)
G377299 NA non-coding upstream 42118 21160799 ~ 21161204 (+)
G377294 NA non-coding upstream 50217 21152414 ~ 21153105 (+)
G377356 NA non-coding downstream 89786 21293402 ~ 21294594 (+)
G377360 NA non-coding downstream 102046 21305662 ~ 21306274 (+)
G377371 NA non-coding downstream 111025 21314641 ~ 21315084 (+)
G377363 NA non-coding downstream 112061 21315677 ~ 21415826 (+)
G377377 NA non-coding downstream 115189 21318805 ~ 21320208 (+)
LOC110522817 LOC106568462 other upstream 366763 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 444821 20508074 ~ 20759255 (+)
G377022 NA other upstream 606459 20591480 ~ 20596863 (+)
G376320 NA other upstream 1219474 19983261 ~ 19983848 (+)
G378660 NA other downstream 968919 22172535 ~ 22231920 (+)
G378832 NA other downstream 1300136 22503752 ~ 22506270 (+)
G378868 NA other downstream 1398494 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1738676 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2420348 23623921 ~ 23678038 (+)

Expression


Co-expression Network