G377360


Basic Information

Item Value
gene id G377360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21305662 ~ 21306274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428923
ATCAAGTTGTTGTCATTTAAATCCAGAATAattagtctatcggtaaatagcccacccatttttacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccaatatctctacctgtacatgacaatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcctcatgccttttgcacacaatgtatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428923 True 229 lncRNA 0.34 2 21305662 21306274

Neighbor

gene id symbol gene type direction distance location
npm2b LOC106592477 coding upstream 17131 21277568 ~ 21288531 (+)
LOC110523400 LOC106568542 coding upstream 145522 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 206373 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 314286 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 361619 20923014 ~ 20944043 (+)
LOC110523406 crybb1 coding downstream 167579 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 172411 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 212283 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 221281 21527555 ~ 21534161 (+)
LOC110523411 LOC106568349 coding downstream 272716 21578990 ~ 21597442 (+)
G377356 NA non-coding upstream 11068 21293402 ~ 21294594 (+)
G377322 NA non-coding upstream 102046 21203322 ~ 21203616 (+)
G377303 NA non-coding upstream 140176 21165129 ~ 21165486 (+)
G377301 NA non-coding upstream 142691 21162454 ~ 21162971 (+)
G377299 NA non-coding upstream 144458 21160799 ~ 21161204 (+)
G377371 NA non-coding downstream 8367 21314641 ~ 21315084 (+)
G377363 NA non-coding downstream 9403 21315677 ~ 21415826 (+)
G377377 NA non-coding downstream 12531 21318805 ~ 21320208 (+)
G377381 NA non-coding downstream 21119 21327393 ~ 21329058 (+)
G377364 NA non-coding downstream 64992 21371266 ~ 21373709 (+)
LOC110522817 LOC106568462 other upstream 469103 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 547161 20508074 ~ 20759255 (+)
G377022 NA other upstream 708799 20591480 ~ 20596863 (+)
G376320 NA other upstream 1321814 19983261 ~ 19983848 (+)
G378660 NA other downstream 866261 22172535 ~ 22231920 (+)
G378832 NA other downstream 1197478 22503752 ~ 22506270 (+)
G378868 NA other downstream 1295836 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1636018 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2317690 23623921 ~ 23678038 (+)

Expression


Co-expression Network