G377371


Basic Information

Item Value
gene id G377371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21314641 ~ 21315084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428942
TGAGATCAGGGCCGtacagtacttaagtaaaaaatactttaatgtaCTACTTAGGTCGTTTTTTAGGGTATATtgtactcaagtatgacatttgggtactttttccaccactgttcatAATAAGTTGACAGTCAGTAACTGTTCTAACCTAAgcagtggtcccattctgtggTCAGTAGCTGTCACCTACCCGTCTCTGGGAAGACTTGTGTACGTCCTCTAActcctcctctttatcctccAGCTCTTTAAGATGAATCTGtttcattctctccatctccatctcaaaACGCAGGTGCAACTAGAGGAAGATAggtggaagaagagaggtggagaaagaggaagaggtggagagggaggaagagaggggggaagaggaagagaggggggaagaggaagagagggg

Function

NR:

description
unconventional myosin-XVIIIb-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428942 True 406 lncRNA 0.45 2 21314641 21315084

Neighbor

gene id symbol gene type direction distance location
npm2b LOC106592477 coding upstream 26110 21277568 ~ 21288531 (+)
LOC110523400 LOC106568542 coding upstream 154501 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 215352 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 323265 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 370598 20923014 ~ 20944043 (+)
LOC110523406 crybb1 coding downstream 158769 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 163601 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 203473 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 212471 21527555 ~ 21534161 (+)
LOC110523411 LOC106568349 coding downstream 263906 21578990 ~ 21597442 (+)
G377360 NA non-coding upstream 8367 21305662 ~ 21306274 (+)
G377356 NA non-coding upstream 20047 21293402 ~ 21294594 (+)
G377322 NA non-coding upstream 111025 21203322 ~ 21203616 (+)
G377303 NA non-coding upstream 149155 21165129 ~ 21165486 (+)
G377301 NA non-coding upstream 151670 21162454 ~ 21162971 (+)
G377363 NA non-coding downstream 593 21315677 ~ 21415826 (+)
G377377 NA non-coding downstream 3721 21318805 ~ 21320208 (+)
G377381 NA non-coding downstream 12309 21327393 ~ 21329058 (+)
G377364 NA non-coding downstream 56182 21371266 ~ 21373709 (+)
G377405 NA non-coding downstream 64502 21379586 ~ 21380147 (+)
LOC110522817 LOC106568462 other upstream 478082 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 556140 20508074 ~ 20759255 (+)
G377022 NA other upstream 717778 20591480 ~ 20596863 (+)
G376320 NA other upstream 1330793 19983261 ~ 19983848 (+)
G378660 NA other downstream 857451 22172535 ~ 22231920 (+)
G378832 NA other downstream 1188668 22503752 ~ 22506270 (+)
G378868 NA other downstream 1287026 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1627208 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2308880 23623921 ~ 23678038 (+)

Expression


Co-expression Network