G377377


Basic Information

Item Value
gene id G377377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21318805 ~ 21320208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428948
GTGCAGTCAAACCTGAGAGTGAGTTTCACCTATTGATCAATCCAAATGACAGGCAGTTACCTCTAGTAGTTCCCCAGCTTGTCCCTGTCCCAGCCTGGGACTCTTTGCTCTGGActttctgtttctcctcctccaaCTGTTTCTCCAGCGTCACCATGGTGACCTTACACTGGCCCAGCCGAGCTGTAGTTCCTTGTTTTCCCTGGTGAGTcgtagtctctctcctctctccatgtcaaGCGCCTGGCTGACAGCTTCACCACGGAAACGCTCATCGCTTAGTTCAGACGACACCGCCGTcacct

Function

NR:

description
PREDICTED: unconventional myosin-XVIIIb, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428948 True 305 lncRNA 0.53 2 21318805 21320208

Neighbor

gene id symbol gene type direction distance location
npm2b LOC106592477 coding upstream 30274 21277568 ~ 21288531 (+)
LOC110523400 LOC106568542 coding upstream 158665 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 219516 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 327429 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 374762 20923014 ~ 20944043 (+)
LOC110523406 crybb1 coding downstream 153645 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 158477 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 198349 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 207347 21527555 ~ 21534161 (+)
LOC110523411 LOC106568349 coding downstream 258782 21578990 ~ 21597442 (+)
G377371 NA non-coding upstream 3721 21314641 ~ 21315084 (+)
G377360 NA non-coding upstream 12531 21305662 ~ 21306274 (+)
G377356 NA non-coding upstream 24211 21293402 ~ 21294594 (+)
G377322 NA non-coding upstream 115189 21203322 ~ 21203616 (+)
G377303 NA non-coding upstream 153319 21165129 ~ 21165486 (+)
G377381 NA non-coding downstream 7185 21327393 ~ 21329058 (+)
G377364 NA non-coding downstream 51058 21371266 ~ 21373709 (+)
G377405 NA non-coding downstream 59378 21379586 ~ 21380147 (+)
G377416 NA non-coding downstream 76493 21396701 ~ 21397114 (+)
G377455 NA non-coding downstream 130259 21450467 ~ 21455436 (+)
LOC110522817 LOC106568462 other upstream 482246 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 560304 20508074 ~ 20759255 (+)
G377022 NA other upstream 721942 20591480 ~ 20596863 (+)
G376320 NA other upstream 1334957 19983261 ~ 19983848 (+)
G378660 NA other downstream 852327 22172535 ~ 22231920 (+)
G378832 NA other downstream 1183544 22503752 ~ 22506270 (+)
G378868 NA other downstream 1281902 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1622084 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2303756 23623921 ~ 23678038 (+)

Expression


Co-expression Network