G377381


Basic Information

Item Value
gene id G377381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21327393 ~ 21329058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428953
CCTGTGCGATAGAGCTGCAGGGCGGGGAGGATGTGTGTAGAGTGTAGCTGGATCCTGAGAGCAGGGACGTCGAATCCTCCACCACTGCTGTCTGTCTTAGCACCCACACACTGCAGGAACACTGGCCTGGCTCGACGAATCAGATTCAATAGAGCATCCTGGAAAGGGGGGTGGCGTGTATTAGGGTAGTTATGGCCTGTAGTTTGACTGATATACAGTGGGAGTGTGTTTTAGGGTACTTATGGCCTGAAGTTTGACTGATTATAAAGTGGGAGTGTGTATTAGGGTACTTATGGCCTGTAGTTTGACTGATATACAGTGGAAGTGTGTTTTAGGGTTTTTACGGCCTGTAGTTTGACTGATATACAGTGGGAGTGTGTATTAGGGTTTTTACGGCCTGTAGTTTGACTGATATACAGTGGGAGTGTGTATTAGGGGACTTACGGCCTGTAGTTTAACTGATATACAGTGGGAGTGTCGGCGTATGGCGGCCATTCCTCCGCTGAAGGTCTTTCTGACGGTGCCACTCCTCTGTAGCGAACGCTGGCtgcccccctccacccctcccaaaCCACGACACAGAGGGGGCACAGAGGCACGGGGGCCGAATAACGCCTTCACTACCCCActggaaatggagagagagaaaaagaggtagaggggtaaag

Function

NR:

description
PREDICTED: unconventional myosin-XVIIIb, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428953 True 668 lncRNA 0.51 3 21327393 21329058

Neighbor

gene id symbol gene type direction distance location
npm2b LOC106592477 coding upstream 38862 21277568 ~ 21288531 (+)
LOC110523400 LOC106568542 coding upstream 167253 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 228104 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 336017 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 383350 20923014 ~ 20944043 (+)
LOC110523406 crybb1 coding downstream 144795 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 149627 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 189499 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 198497 21527555 ~ 21534161 (+)
LOC110523411 LOC106568349 coding downstream 249932 21578990 ~ 21597442 (+)
G377377 NA non-coding upstream 7185 21318805 ~ 21320208 (+)
G377371 NA non-coding upstream 12309 21314641 ~ 21315084 (+)
G377360 NA non-coding upstream 21119 21305662 ~ 21306274 (+)
G377356 NA non-coding upstream 32799 21293402 ~ 21294594 (+)
G377322 NA non-coding upstream 123777 21203322 ~ 21203616 (+)
G377364 NA non-coding downstream 42208 21371266 ~ 21373709 (+)
G377405 NA non-coding downstream 50528 21379586 ~ 21380147 (+)
G377416 NA non-coding downstream 67643 21396701 ~ 21397114 (+)
G377455 NA non-coding downstream 121409 21450467 ~ 21455436 (+)
G377494 NA non-coding downstream 188687 21517745 ~ 21518246 (+)
LOC110522817 LOC106568462 other upstream 490834 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 568892 20508074 ~ 20759255 (+)
G377022 NA other upstream 730530 20591480 ~ 20596863 (+)
G376320 NA other upstream 1343545 19983261 ~ 19983848 (+)
G378660 NA other downstream 843477 22172535 ~ 22231920 (+)
G378832 NA other downstream 1174694 22503752 ~ 22506270 (+)
G378868 NA other downstream 1273052 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1613234 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2294906 23623921 ~ 23678038 (+)

Expression


Co-expression Network