G377405


Basic Information

Item Value
gene id G377405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21379586 ~ 21380147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428985
GGTGAAACAGTGTGAGACACGGTGAAACAGTGAGGGACACGGTGAAACAGTGTGGGACACGGTGAAACAGTGTGGGAAACGGTGAAACAGTGTGGGACACGGTGAAACAGTGTGGGAAACGGTGAAAGAGAAACAGTGTGGGACACGGTGAAACAGTGTGGGACACGGTGAAACAGTGTGGGACACGGTGAAACAGTGAGGGACACGGTGAAACAGTGTGGGACACGGTGAAACAGTGAGGGACACGGTGAAACAGTGAGGGA

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 5, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428985 True 263 lncRNA 0.53 2 21379586 21380147

Neighbor

gene id symbol gene type direction distance location
npm2b LOC106592477 coding upstream 91055 21277568 ~ 21288531 (+)
LOC110523400 LOC106568542 coding upstream 219446 21108129 ~ 21160149 (+)
LOC110522819 LOC106568526 coding upstream 280297 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 388210 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 435543 20923014 ~ 20944043 (+)
LOC110523406 crybb1 coding downstream 93706 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 98538 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 138410 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 147408 21527555 ~ 21534161 (+)
LOC110523411 LOC106568349 coding downstream 198843 21578990 ~ 21597442 (+)
G377364 NA non-coding upstream 5877 21371266 ~ 21373709 (+)
G377381 NA non-coding upstream 50528 21327393 ~ 21329058 (+)
G377377 NA non-coding upstream 59378 21318805 ~ 21320208 (+)
G377371 NA non-coding upstream 64502 21314641 ~ 21315084 (+)
G377360 NA non-coding upstream 73312 21305662 ~ 21306274 (+)
G377416 NA non-coding downstream 16554 21396701 ~ 21397114 (+)
G377455 NA non-coding downstream 70320 21450467 ~ 21455436 (+)
G377494 NA non-coding downstream 137598 21517745 ~ 21518246 (+)
G377505 NA non-coding downstream 170190 21550337 ~ 21550561 (+)
G377513 NA non-coding downstream 185127 21565274 ~ 21565606 (+)
LOC110522817 LOC106568462 other upstream 543027 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 621085 20508074 ~ 20759255 (+)
G377022 NA other upstream 782723 20591480 ~ 20596863 (+)
G376320 NA other upstream 1395738 19983261 ~ 19983848 (+)
G378660 NA other downstream 792388 22172535 ~ 22231920 (+)
G378832 NA other downstream 1123605 22503752 ~ 22506270 (+)
G378868 NA other downstream 1221963 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1562145 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2243817 23623921 ~ 23678038 (+)

Expression


Co-expression Network