Gene
RNA
| Item | Value |
|---|---|
| gene id | G377455 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21450467 ~ 21455436 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU429037 | True | 336 | lncRNA | 0.45 | 2 | 21450467 | 21455436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| npm2b | LOC106592477 | coding | upstream | 161936 | 21277568 ~ 21288531 (+) |
| LOC110523400 | LOC106568542 | coding | upstream | 290327 | 21108129 ~ 21160149 (+) |
| LOC110522819 | LOC106568526 | coding | upstream | 351178 | 21050936 ~ 21099289 (+) |
| LOC110523398 | LOC100534606 | coding | upstream | 459091 | 20952149 ~ 20991376 (+) |
| ccar2 | LOC106568504 | coding | upstream | 506424 | 20923014 ~ 20944043 (+) |
| LOC110523406 | crybb1 | coding | downstream | 18417 | 21473853 ~ 21477171 (+) |
| LOC110523407 | LOC106568363 | coding | downstream | 23249 | 21478685 ~ 21493435 (+) |
| LOC110523409 | LOC106565015 | coding | downstream | 63121 | 21518557 ~ 21521828 (+) |
| LOC110523408 | LOC106565015 | coding | downstream | 72119 | 21527555 ~ 21534161 (+) |
| LOC110523411 | LOC106568349 | coding | downstream | 123554 | 21578990 ~ 21597442 (+) |
| G377363 | NA | non-coding | upstream | 34641 | 21315677 ~ 21415826 (+) |
| G377416 | NA | non-coding | upstream | 53353 | 21396701 ~ 21397114 (+) |
| G377405 | NA | non-coding | upstream | 70320 | 21379586 ~ 21380147 (+) |
| G377364 | NA | non-coding | upstream | 76758 | 21371266 ~ 21373709 (+) |
| G377381 | NA | non-coding | upstream | 121409 | 21327393 ~ 21329058 (+) |
| G377494 | NA | non-coding | downstream | 62309 | 21517745 ~ 21518246 (+) |
| G377505 | NA | non-coding | downstream | 94901 | 21550337 ~ 21550561 (+) |
| G377513 | NA | non-coding | downstream | 109838 | 21565274 ~ 21565606 (+) |
| G377517 | NA | non-coding | downstream | 113518 | 21568954 ~ 21569214 (+) |
| G377520 | NA | non-coding | downstream | 115773 | 21571209 ~ 21572272 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 613908 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 691966 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 853604 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1466619 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 717099 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1048316 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1146674 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1486856 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 2168528 | 23623921 ~ 23678038 (+) |
