Gene
RNA
| Item | Value |
|---|---|
| gene id | G377513 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21565274 ~ 21565606 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU429104 | True | 333 | lncRNA | 0.38 | 1 | 21565274 | 21565606 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523408 | LOC106565015 | coding | upstream | 31113 | 21527555 ~ 21534161 (+) |
| LOC110523409 | LOC106565015 | coding | upstream | 43446 | 21518557 ~ 21521828 (+) |
| LOC110523407 | LOC106568363 | coding | upstream | 71839 | 21478685 ~ 21493435 (+) |
| LOC110523406 | crybb1 | coding | upstream | 88103 | 21473853 ~ 21477171 (+) |
| npm2b | LOC106592477 | coding | upstream | 276743 | 21277568 ~ 21288531 (+) |
| LOC110523411 | LOC106568349 | coding | downstream | 13384 | 21578990 ~ 21597442 (+) |
| LOC110523412 | LOC106568387 | coding | downstream | 36427 | 21602033 ~ 21609081 (+) |
| LOC110523413 | LOC106568345 | coding | downstream | 50594 | 21616200 ~ 21622938 (+) |
| LOC110523414 | cetn3 | coding | downstream | 67926 | 21633532 ~ 21635979 (+) |
| LOC110523415 | LOC106568324 | coding | downstream | 103815 | 21669421 ~ 21684268 (+) |
| G377505 | NA | non-coding | upstream | 14713 | 21550337 ~ 21550561 (+) |
| G377494 | NA | non-coding | upstream | 47028 | 21517745 ~ 21518246 (+) |
| G377455 | NA | non-coding | upstream | 109838 | 21450467 ~ 21455436 (+) |
| G377416 | NA | non-coding | upstream | 168160 | 21396701 ~ 21397114 (+) |
| G377405 | NA | non-coding | upstream | 185127 | 21379586 ~ 21380147 (+) |
| G377517 | NA | non-coding | downstream | 3348 | 21568954 ~ 21569214 (+) |
| G377520 | NA | non-coding | downstream | 5603 | 21571209 ~ 21572272 (+) |
| G377523 | NA | non-coding | downstream | 11598 | 21577204 ~ 21577584 (+) |
| G377527 | NA | non-coding | downstream | 23889 | 21589495 ~ 21591705 (+) |
| G377533 | NA | non-coding | downstream | 46513 | 21612119 ~ 21612381 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 406355 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 728715 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 806773 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 968411 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1581426 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 606929 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 938146 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 1036504 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1376686 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 2058358 | 23623921 ~ 23678038 (+) |
