Gene
RNA
| Item | Value |
|---|---|
| gene id | G377533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21612119 ~ 21612381 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU429137 | True | 263 | lncRNA | 0.47 | 1 | 21612119 | 21612381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523412 | LOC106568387 | coding | upstream | 3038 | 21602033 ~ 21609081 (+) |
| LOC110523411 | LOC106568349 | coding | upstream | 14677 | 21578990 ~ 21597442 (+) |
| LOC110523408 | LOC106565015 | coding | upstream | 77958 | 21527555 ~ 21534161 (+) |
| LOC110523409 | LOC106565015 | coding | upstream | 90291 | 21518557 ~ 21521828 (+) |
| LOC110523407 | LOC106568363 | coding | upstream | 118684 | 21478685 ~ 21493435 (+) |
| LOC110523413 | LOC106568345 | coding | downstream | 3819 | 21616200 ~ 21622938 (+) |
| LOC110523414 | cetn3 | coding | downstream | 21151 | 21633532 ~ 21635979 (+) |
| LOC110523415 | LOC106568324 | coding | downstream | 57040 | 21669421 ~ 21684268 (+) |
| LOC110522823 | NA | coding | downstream | 76787 | 21689168 ~ 21695622 (+) |
| LOC110523419 | LOC106568313 | coding | downstream | 153324 | 21765705 ~ 21769900 (+) |
| G377527 | NA | non-coding | upstream | 20414 | 21589495 ~ 21591705 (+) |
| G377523 | NA | non-coding | upstream | 34535 | 21577204 ~ 21577584 (+) |
| G377520 | NA | non-coding | upstream | 39847 | 21571209 ~ 21572272 (+) |
| G377517 | NA | non-coding | upstream | 42905 | 21568954 ~ 21569214 (+) |
| G377513 | NA | non-coding | upstream | 46513 | 21565274 ~ 21565606 (+) |
| G377535 | NA | non-coding | downstream | 2697 | 21615078 ~ 21615793 (+) |
| G377619 | NA | non-coding | downstream | 168007 | 21780388 ~ 21780616 (+) |
| G377628 | NA | non-coding | downstream | 178200 | 21790581 ~ 21790798 (+) |
| G377629 | NA | non-coding | downstream | 178497 | 21790878 ~ 21791428 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 453200 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 775560 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 853618 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1015256 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1628271 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 560154 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 891371 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 989729 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1329911 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 2011583 | 23623921 ~ 23678038 (+) |
