G377619


Basic Information

Item Value
gene id G377619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21780388 ~ 21780616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU429245
tggatttgagtccctggcggcgtagtgtgttactgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtccccccgtgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggcgccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429245 True 229 lncRNA 0.51 1 21780388 21780616

Neighbor

gene id symbol gene type direction distance location
LOC110523419 LOC106568313 coding upstream 10488 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 84766 21689168 ~ 21695622 (+)
LOC110523415 LOC106568324 coding upstream 96120 21669421 ~ 21684268 (+)
LOC110523414 cetn3 coding upstream 144409 21633532 ~ 21635979 (+)
LOC110523413 LOC106568345 coding upstream 157450 21616200 ~ 21622938 (+)
LOC110523420 LOC106568307 coding downstream 17724 21798340 ~ 21808924 (+)
LOC110523421 LOC106568255 coding downstream 36162 21816778 ~ 21822877 (+)
LOC110523423 LOC106568289 coding downstream 61452 21842068 ~ 21847237 (+)
LOC110523424 LOC106567937 coding downstream 173467 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 180859 21961475 ~ 21990926 (+)
G377535 NA non-coding upstream 164595 21615078 ~ 21615793 (+)
G377533 NA non-coding upstream 168007 21612119 ~ 21612381 (+)
G377527 NA non-coding upstream 188683 21589495 ~ 21591705 (+)
G377523 NA non-coding upstream 202804 21577204 ~ 21577584 (+)
G377628 NA non-coding downstream 9965 21790581 ~ 21790798 (+)
G377629 NA non-coding downstream 10262 21790878 ~ 21791428 (+)
G377630 NA non-coding downstream 10886 21791502 ~ 21791809 (+)
G377650 NA non-coding downstream 54101 21834717 ~ 21835040 (+)
LOC110523400 LOC106568542 other upstream 621469 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 943829 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1021887 20508074 ~ 20759255 (+)
G377022 NA other upstream 1183525 20591480 ~ 20596863 (+)
G376320 NA other upstream 1796540 19983261 ~ 19983848 (+)
G378660 NA other downstream 391919 22172535 ~ 22231920 (+)
G378832 NA other downstream 723136 22503752 ~ 22506270 (+)
G378868 NA other downstream 821494 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1161676 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1843348 23623921 ~ 23678038 (+)

Expression


Co-expression Network