G377630


Basic Information

Item Value
gene id G377630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21791502 ~ 21791809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU429256
gtatgatgaacagagagtagcagcagcataaaagaggggttggggcggaacacaatgcaaatagtccgggtaaccatttgattacctgttcaggagtcgtatggcttgggggtaaaactgttgagaagccttcttgtcctagacttggcactccggtaccgcttgccatgcggtagtagagagaacagtctatgactagggtggctggggtctttgacaatttttaccctctgtagtgccttgcggtcggaggccgagcaattgccgtaccaggcagtgatgcaaccagtcagcatgctctcgatgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429256 True 308 lncRNA 0.51 1 21791502 21791809

Neighbor

gene id symbol gene type direction distance location
LOC110523419 LOC106568313 coding upstream 21602 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 95880 21689168 ~ 21695622 (+)
LOC110523415 LOC106568324 coding upstream 107234 21669421 ~ 21684268 (+)
LOC110523414 cetn3 coding upstream 155523 21633532 ~ 21635979 (+)
LOC110523413 LOC106568345 coding upstream 168564 21616200 ~ 21622938 (+)
LOC110523420 LOC106568307 coding downstream 6531 21798340 ~ 21808924 (+)
LOC110523421 LOC106568255 coding downstream 24969 21816778 ~ 21822877 (+)
LOC110523423 LOC106568289 coding downstream 50259 21842068 ~ 21847237 (+)
LOC110523424 LOC106567937 coding downstream 162274 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 169666 21961475 ~ 21990926 (+)
G377629 NA non-coding upstream 74 21790878 ~ 21791428 (+)
G377628 NA non-coding upstream 704 21790581 ~ 21790798 (+)
G377619 NA non-coding upstream 10886 21780388 ~ 21780616 (+)
G377535 NA non-coding upstream 175709 21615078 ~ 21615793 (+)
G377650 NA non-coding downstream 42908 21834717 ~ 21835040 (+)
G377658 NA non-coding downstream 57690 21849499 ~ 21850193 (+)
G377656 NA non-coding downstream 62374 21854183 ~ 21854828 (+)
G378403 NA non-coding downstream 68785 21860594 ~ 21865869 (+)
LOC110523400 LOC106568542 other upstream 632583 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 954943 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1033001 20508074 ~ 20759255 (+)
G377022 NA other upstream 1194639 20591480 ~ 20596863 (+)
G376320 NA other upstream 1807654 19983261 ~ 19983848 (+)
G378660 NA other downstream 380726 22172535 ~ 22231920 (+)
G378832 NA other downstream 711943 22503752 ~ 22506270 (+)
G378868 NA other downstream 810301 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1150483 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1832155 23623921 ~ 23678038 (+)

Expression


Co-expression Network