G377650


Basic Information

Item Value
gene id G377650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21834717 ~ 21835040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU429278
attttcacctgtgaggggagaaggagagaaaagaaacacacacacaggatacacacacaggatacttgtatccgtaacacatgtaatcctagtaaaaattctgtgtcttaggtcatttaggatcaccactttattttaagaatgtgaaatgtcagaataatagtagagagaatgatttctttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattaatatttggtagcattgcctttaaatggtttaacttgggtcaaacgtttcagatagccttccacaagcttcccacaataagttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429278 True 324 lncRNA 0.36 1 21834717 21835040

Neighbor

gene id symbol gene type direction distance location
LOC110523421 LOC106568255 coding upstream 11840 21816778 ~ 21822877 (+)
LOC110523420 LOC106568307 coding upstream 25793 21798340 ~ 21808924 (+)
LOC110523419 LOC106568313 coding upstream 64817 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 139095 21689168 ~ 21695622 (+)
LOC110523415 LOC106568324 coding upstream 150449 21669421 ~ 21684268 (+)
LOC110523423 LOC106568289 coding downstream 7028 21842068 ~ 21847237 (+)
LOC110523424 LOC106567937 coding downstream 119043 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 126435 21961475 ~ 21990926 (+)
LOC100135946 LOC100135946 coding downstream 162616 21997656 ~ 22000508 (+)
LOC110523429 acty coding downstream 210931 22045971 ~ 22053104 (+)
G377630 NA non-coding upstream 42908 21791502 ~ 21791809 (+)
G377629 NA non-coding upstream 43289 21790878 ~ 21791428 (+)
G377628 NA non-coding upstream 43919 21790581 ~ 21790798 (+)
G377619 NA non-coding upstream 54101 21780388 ~ 21780616 (+)
G377658 NA non-coding downstream 14459 21849499 ~ 21850193 (+)
G377656 NA non-coding downstream 19143 21854183 ~ 21854828 (+)
G378403 NA non-coding downstream 25554 21860594 ~ 21865869 (+)
G378406 NA non-coding downstream 30948 21865988 ~ 21866406 (+)
G378410 NA non-coding downstream 32022 21867062 ~ 21867445 (+)
LOC110523400 LOC106568542 other upstream 675798 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 998158 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1076216 20508074 ~ 20759255 (+)
G377022 NA other upstream 1237854 20591480 ~ 20596863 (+)
G376320 NA other upstream 1850869 19983261 ~ 19983848 (+)
G378660 NA other downstream 337495 22172535 ~ 22231920 (+)
G378832 NA other downstream 668712 22503752 ~ 22506270 (+)
G378868 NA other downstream 767070 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1107252 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1788924 23623921 ~ 23678038 (+)

Expression


Co-expression Network