G378434


Basic Information

Item Value
gene id G378434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21896331 ~ 21896693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430158
atagttttttatattttctgggtcaaggtttggctttttcaagagaggctttattactgccacttttagtgagtttggtacacattcggtggatagagagccgtttattatgttcaacataggagggccaagtacaggaagcagctctttcagtagtttagttggaatagggtccagtatgcagcttgaaggtttagaggccatgattattttcatcattgtgtcaagagatatagtactaaaacacttgagcgtctctcttgatcctaggtcctggcagagttgtgcagactcaggacaactgagctttgaaggaatacgcagatttaaagaggagtccgtaatttgctttctaataatcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430158 True 363 lncRNA 0.40 1 21896331 21896693

Neighbor

gene id symbol gene type direction distance location
LOC110523423 LOC106568289 coding upstream 49094 21842068 ~ 21847237 (+)
LOC110523421 LOC106568255 coding upstream 73454 21816778 ~ 21822877 (+)
LOC110523420 LOC106568307 coding upstream 87407 21798340 ~ 21808924 (+)
LOC110523419 LOC106568313 coding upstream 126431 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 200709 21689168 ~ 21695622 (+)
LOC110523424 LOC106567937 coding downstream 57390 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 64782 21961475 ~ 21990926 (+)
LOC100135946 LOC100135946 coding downstream 100963 21997656 ~ 22000508 (+)
LOC110523429 acty coding downstream 149278 22045971 ~ 22053104 (+)
LOC110523432 LOC106567996 coding downstream 293675 22190368 ~ 22221369 (+)
G378431 NA non-coding upstream 1066 21895041 ~ 21895265 (+)
G378410 NA non-coding upstream 28886 21867062 ~ 21867445 (+)
G378406 NA non-coding upstream 29925 21865988 ~ 21866406 (+)
G378403 NA non-coding upstream 30462 21860594 ~ 21865869 (+)
G377656 NA non-coding upstream 41503 21854183 ~ 21854828 (+)
G378447 NA non-coding downstream 13962 21910655 ~ 21910945 (+)
G378448 NA non-coding downstream 14614 21911307 ~ 21911539 (+)
G378450 NA non-coding downstream 15396 21912089 ~ 21912494 (+)
G378454 NA non-coding downstream 22809 21919502 ~ 21919730 (+)
G378455 NA non-coding downstream 23539 21920232 ~ 21920932 (+)
LOC110523400 LOC106568542 other upstream 737412 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1059772 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1137830 20508074 ~ 20759255 (+)
G377022 NA other upstream 1299468 20591480 ~ 20596863 (+)
G376320 NA other upstream 1912483 19983261 ~ 19983848 (+)
G378660 NA other downstream 275842 22172535 ~ 22231920 (+)
G378832 NA other downstream 607059 22503752 ~ 22506270 (+)
G378868 NA other downstream 705417 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1045599 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1727271 23623921 ~ 23678038 (+)

Expression


Co-expression Network