G378447



Basic Information


Item Value
gene id G378447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21910655 ~ 21910945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU430171
acccaacgtagctatttttcttaaagtatttatatttacttcggaaccggaacccctcaactgaagctagccagctaaccaccagctgtgctagcggtcttcagctaaccggtcatcagctaacctttagctcggtaagctctcgccagttcgaacaacgcgactaaCCAGAGCACAACGGacctatttatttttttcatccccggattcatccccggattcccaccgcaaacggaacatttctcagctggatcttcacaactagctatctagctaaaccgcaaccccgga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU430171 True 291 lncRNA 0.48 1 21910655 21910945

Neighbor


gene id symbol gene type direction distance location
LOC110523423 LOC106568289 coding upstream 63418 21842068 ~ 21847237 (+)
LOC110523421 LOC106568255 coding upstream 87778 21816778 ~ 21822877 (+)
LOC110523420 LOC106568307 coding upstream 101731 21798340 ~ 21808924 (+)
LOC110523419 LOC106568313 coding upstream 140755 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 215033 21689168 ~ 21695622 (+)
LOC110523424 LOC106567937 coding downstream 43138 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 50530 21961475 ~ 21990926 (+)
LOC100135946 LOC100135946 coding downstream 86711 21997656 ~ 22000508 (+)
LOC110523429 acty coding downstream 135026 22045971 ~ 22053104 (+)
LOC110523432 LOC106567996 coding downstream 279423 22190368 ~ 22221369 (+)
G378434 NA non-coding upstream 13962 21896331 ~ 21896693 (+)
G378431 NA non-coding upstream 15390 21895041 ~ 21895265 (+)
G378410 NA non-coding upstream 43210 21867062 ~ 21867445 (+)
G378406 NA non-coding upstream 44249 21865988 ~ 21866406 (+)
G378403 NA non-coding upstream 44786 21860594 ~ 21865869 (+)
G378448 NA non-coding downstream 362 21911307 ~ 21911539 (+)
G378450 NA non-coding downstream 1144 21912089 ~ 21912494 (+)
G378454 NA non-coding downstream 8557 21919502 ~ 21919730 (+)
G378455 NA non-coding downstream 9287 21920232 ~ 21920932 (+)
G378465 NA non-coding downstream 20256 21931201 ~ 21931642 (+)
LOC110523400 LOC106568542 other upstream 751736 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1074096 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1152154 20508074 ~ 20759255 (+)
G377022 NA other upstream 1313792 20591480 ~ 20596863 (+)
G376320 NA other upstream 1926807 19983261 ~ 19983848 (+)
G378660 NA other downstream 261590 22172535 ~ 22231920 (+)
G378832 NA other downstream 592807 22503752 ~ 22506270 (+)
G378868 NA other downstream 691165 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1031347 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1713019 23623921 ~ 23678038 (+)

Expression



Co-expression Network