Gene
RNA
| Item | Value |
|---|---|
| gene id | G378448 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21911307 ~ 21911539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430172 | True | 233 | lncRNA | 0.42 | 1 | 21911307 | 21911539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523423 | LOC106568289 | coding | upstream | 64070 | 21842068 ~ 21847237 (+) |
| LOC110523421 | LOC106568255 | coding | upstream | 88430 | 21816778 ~ 21822877 (+) |
| LOC110523420 | LOC106568307 | coding | upstream | 102383 | 21798340 ~ 21808924 (+) |
| LOC110523419 | LOC106568313 | coding | upstream | 141407 | 21765705 ~ 21769900 (+) |
| LOC110522823 | NA | coding | upstream | 215685 | 21689168 ~ 21695622 (+) |
| LOC110523424 | LOC106567937 | coding | downstream | 42544 | 21954083 ~ 21958510 (+) |
| LOC110522824 | LOC106563065 | coding | downstream | 49936 | 21961475 ~ 21990926 (+) |
| LOC100135946 | LOC100135946 | coding | downstream | 86117 | 21997656 ~ 22000508 (+) |
| LOC110523429 | acty | coding | downstream | 134432 | 22045971 ~ 22053104 (+) |
| LOC110523432 | LOC106567996 | coding | downstream | 278829 | 22190368 ~ 22221369 (+) |
| G378447 | NA | non-coding | upstream | 362 | 21910655 ~ 21910945 (+) |
| G378434 | NA | non-coding | upstream | 14614 | 21896331 ~ 21896693 (+) |
| G378431 | NA | non-coding | upstream | 16042 | 21895041 ~ 21895265 (+) |
| G378410 | NA | non-coding | upstream | 43862 | 21867062 ~ 21867445 (+) |
| G378406 | NA | non-coding | upstream | 44901 | 21865988 ~ 21866406 (+) |
| G378450 | NA | non-coding | downstream | 550 | 21912089 ~ 21912494 (+) |
| G378454 | NA | non-coding | downstream | 7963 | 21919502 ~ 21919730 (+) |
| G378455 | NA | non-coding | downstream | 8693 | 21920232 ~ 21920932 (+) |
| G378465 | NA | non-coding | downstream | 19662 | 21931201 ~ 21931642 (+) |
| G378466 | NA | non-coding | downstream | 22142 | 21933681 ~ 21933970 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 752388 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 1074748 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 1152806 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1314444 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1927459 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 260996 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 592213 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 690571 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1030753 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 1712425 | 23623921 ~ 23678038 (+) |
