G378454


Basic Information

Item Value
gene id G378454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21919502 ~ 21919730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430178
ggagaaaacagagagagagacagcgagtaaagaaggagagagagagagggaggagagggagagagcagagagagagacagcgagtaaagaaggagagagagagagggaggagagggagagagcagagagagagacagcgagtaaagaaggagagagggaggagagaaacagagaacagagagagacagcgagtaaagaaggagagagagggaggagagaaacagagagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430178 True 229 lncRNA 0.52 1 21919502 21919730

Neighbor

gene id symbol gene type direction distance location
LOC110523423 LOC106568289 coding upstream 72265 21842068 ~ 21847237 (+)
LOC110523421 LOC106568255 coding upstream 96625 21816778 ~ 21822877 (+)
LOC110523420 LOC106568307 coding upstream 110578 21798340 ~ 21808924 (+)
LOC110523419 LOC106568313 coding upstream 149602 21765705 ~ 21769900 (+)
LOC110522823 NA coding upstream 223880 21689168 ~ 21695622 (+)
LOC110523424 LOC106567937 coding downstream 34353 21954083 ~ 21958510 (+)
LOC110522824 LOC106563065 coding downstream 41745 21961475 ~ 21990926 (+)
LOC100135946 LOC100135946 coding downstream 77926 21997656 ~ 22000508 (+)
LOC110523429 acty coding downstream 126241 22045971 ~ 22053104 (+)
LOC110523432 LOC106567996 coding downstream 270638 22190368 ~ 22221369 (+)
G378450 NA non-coding upstream 7008 21912089 ~ 21912494 (+)
G378448 NA non-coding upstream 7963 21911307 ~ 21911539 (+)
G378447 NA non-coding upstream 8557 21910655 ~ 21910945 (+)
G378434 NA non-coding upstream 22809 21896331 ~ 21896693 (+)
G378431 NA non-coding upstream 24237 21895041 ~ 21895265 (+)
G378455 NA non-coding downstream 502 21920232 ~ 21920932 (+)
G378465 NA non-coding downstream 11471 21931201 ~ 21931642 (+)
G378466 NA non-coding downstream 13951 21933681 ~ 21933970 (+)
G378467 NA non-coding downstream 17200 21936930 ~ 21937324 (+)
G378472 NA non-coding downstream 25983 21945713 ~ 21945968 (+)
LOC110523400 LOC106568542 other upstream 760583 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1082943 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1161001 20508074 ~ 20759255 (+)
G377022 NA other upstream 1322639 20591480 ~ 20596863 (+)
G376320 NA other upstream 1935654 19983261 ~ 19983848 (+)
G378660 NA other downstream 252805 22172535 ~ 22231920 (+)
G378832 NA other downstream 584022 22503752 ~ 22506270 (+)
G378868 NA other downstream 682380 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1022562 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 1704234 23623921 ~ 23678038 (+)

Expression


Co-expression Network