Gene
RNA
| Item | Value |
|---|---|
| gene id | G379421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22038565 ~ 22038803 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU431296 | True | 239 | lncRNA | 0.37 | 1 | 22038565 | 22038803 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523428 | LOC105015193 | coding | downstream | 617 | 22033823 ~ 22037948 (-) |
| LOC110523426 | LOC106567959 | coding | downstream | 17005 | 22003337 ~ 22021560 (-) |
| LOC110523425 | NA | coding | downstream | 79123 | 21957792 ~ 21959442 (-) |
| LOC118964574 | NA | coding | downstream | 272424 | 21760374 ~ 21766141 (-) |
| LOC110523418 | LOC106568264 | coding | downstream | 304159 | 21703680 ~ 21734406 (-) |
| march5 | march5 | coding | upstream | 3978 | 22042781 ~ 22045492 (-) |
| LOC110523430 | LOC106567981 | coding | upstream | 29098 | 22067901 ~ 22087866 (-) |
| LOC110523434 | LOC106567989 | coding | upstream | 138525 | 22177265 ~ 22179322 (-) |
| LOC110523433 | LOC106567986 | coding | upstream | 140872 | 22179675 ~ 22191846 (-) |
| LOC110516770 | LOC106568012 | coding | upstream | 185730 | 22224533 ~ 22231921 (-) |
| G378539 | NA | non-coding | downstream | 57703 | 21962061 ~ 21980862 (-) |
| G378535 | NA | non-coding | downstream | 88752 | 21949602 ~ 21949813 (-) |
| G378533 | NA | non-coding | downstream | 91040 | 21947148 ~ 21947525 (-) |
| G378532 | NA | non-coding | downstream | 91796 | 21946561 ~ 21946769 (-) |
| G379423 | NA | non-coding | upstream | 3146 | 22041949 ~ 22042274 (-) |
| G379436 | NA | non-coding | upstream | 19749 | 22058552 ~ 22058825 (-) |
| G379437 | NA | non-coding | upstream | 20398 | 22059201 ~ 22059438 (-) |
| G379438 | NA | non-coding | upstream | 21139 | 22059942 ~ 22060338 (-) |
| G379433 | NA | non-coding | upstream | 25939 | 22064742 ~ 22066209 (-) |
| G378359 | NA | other | downstream | 246572 | 21791662 ~ 21791993 (-) |
| G377991 | NA | other | downstream | 1008782 | 21029458 ~ 21029783 (-) |
| G377809 | LOC106568602 | other | downstream | 1333425 | 20704613 ~ 20705140 (-) |
| G377800 | NA | other | downstream | 1343857 | 20694096 ~ 20694708 (-) |
| G374786 | NA | other | downstream | 3479398 | 18558140 ~ 18559167 (-) |
| jmy | LOC106568093 | other | upstream | 760897 | 22799696 ~ 22859199 (-) |
| LOC110522831 | LOC106563032 | other | upstream | 1508397 | 23488916 ~ 23556681 (-) |
| G380610 | LOC106567829 | other | upstream | 1670995 | 23709798 ~ 23711891 (-) |
| G380648 | NA | other | upstream | 1720236 | 23759039 ~ 23761807 (-) |
