G378571


Basic Information

Item Value
gene id G378571
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22039349 ~ 22039566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430320
tagctagctctcccaatcaacacccgtgattgctttatgcctcactttacctctctctcaaatgtcaatatgccttgtacacTGTTGTTTAGGacagttatcattgttttagtttactgcggagctcctagtcccactcaacatgcctcagatacctcctttgtcccatctcccacacatgcggtgacctcacccagcataactagcccgtccagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430320 True 218 lncRNA 0.47 1 22039349 22039566

Neighbor

gene id symbol gene type direction distance location
LOC100135946 LOC100135946 coding upstream 38841 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 48423 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 80839 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 192112 21842068 ~ 21847237 (+)
LOC110523421 LOC106568255 coding upstream 216472 21816778 ~ 21822877 (+)
LOC110523429 acty coding downstream 6405 22045971 ~ 22053104 (+)
LOC110523432 LOC106567996 coding downstream 150802 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 729099 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 834604 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 902639 22942205 ~ 23007315 (+)
G378570 NA non-coding upstream 101 22038994 ~ 22039248 (+)
G378513 NA non-coding upstream 1495 22037383 ~ 22037854 (+)
G378512 kctd9 non-coding upstream 2399 22033840 ~ 22036950 (+)
G378486 NA non-coding upstream 34325 21982512 ~ 22005024 (+)
G378489 NA non-coding upstream 58005 21980931 ~ 21981344 (+)
G378573 NA non-coding downstream 825 22040391 ~ 22040640 (+)
G378579 NA non-coding downstream 19976 22059542 ~ 22060247 (+)
G378582 NA non-coding downstream 25401 22064967 ~ 22066212 (+)
G378583 NA non-coding downstream 26824 22066390 ~ 22067020 (+)
G378584 NA non-coding downstream 28339 22067905 ~ 22068991 (+)
LOC110523400 LOC106568542 other upstream 880430 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1202790 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1280848 20508074 ~ 20759255 (+)
G377022 NA other upstream 1442486 20591480 ~ 20596863 (+)
G376320 NA other upstream 2055501 19983261 ~ 19983848 (+)
G378660 NA other downstream 132969 22172535 ~ 22231920 (+)
G378832 NA other downstream 464186 22503752 ~ 22506270 (+)
G378868 NA other downstream 562544 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1584398 23623921 ~ 23678038 (+)

Expression


Co-expression Network