Gene
RNA
| Item | Value |
|---|---|
| gene id | G378579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22059542 ~ 22060247 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430329 | True | 706 | lncRNA | 0.41 | 1 | 22059542 | 22060247 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523429 | acty | coding | upstream | 6438 | 22045971 ~ 22053104 (+) |
| LOC100135946 | LOC100135946 | coding | upstream | 59034 | 21997656 ~ 22000508 (+) |
| LOC110522824 | LOC106563065 | coding | upstream | 68616 | 21961475 ~ 21990926 (+) |
| LOC110523424 | LOC106567937 | coding | upstream | 101032 | 21954083 ~ 21958510 (+) |
| LOC110523423 | LOC106568289 | coding | upstream | 212305 | 21842068 ~ 21847237 (+) |
| LOC110523432 | LOC106567996 | coding | downstream | 130121 | 22190368 ~ 22221369 (+) |
| LOC110523445 | LOC106568100 | coding | downstream | 708418 | 22768665 ~ 22799421 (+) |
| dmgdh | dmgdh | coding | downstream | 813923 | 22874170 ~ 22903435 (+) |
| lhfpl2a | lhfpl2 | coding | downstream | 881958 | 22942205 ~ 23007315 (+) |
| LOC110523451 | ap3b1 | coding | downstream | 1005407 | 23065654 ~ 23158020 (+) |
| G378573 | NA | non-coding | upstream | 18902 | 22040391 ~ 22040640 (+) |
| G378571 | NA | non-coding | upstream | 19976 | 22039349 ~ 22039566 (+) |
| G378570 | NA | non-coding | upstream | 20294 | 22038994 ~ 22039248 (+) |
| G378513 | NA | non-coding | upstream | 21688 | 22037383 ~ 22037854 (+) |
| G378512 | kctd9 | non-coding | upstream | 22592 | 22033840 ~ 22036950 (+) |
| G378582 | NA | non-coding | downstream | 4720 | 22064967 ~ 22066212 (+) |
| G378583 | NA | non-coding | downstream | 6143 | 22066390 ~ 22067020 (+) |
| G378584 | NA | non-coding | downstream | 7658 | 22067905 ~ 22068991 (+) |
| G378585 | NA | non-coding | downstream | 9052 | 22069299 ~ 22069557 (+) |
| G378586 | NA | non-coding | downstream | 9696 | 22069943 ~ 22070292 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 900623 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 1222983 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 1301041 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1462679 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 2075694 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 112288 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 443505 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 541863 | 22602110 ~ 22629669 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 1563717 | 23623921 ~ 23678038 (+) |
