G378584


Basic Information

Item Value
gene id G378584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22067905 ~ 22068991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430335
agaaaattgtaaaaataaagaaaaagccttgaatgagtaggtgttctaaaacctttgaacGGCAATGTATGTACATTCTGATCGTTGACCATGGCTCTGATATTTCTACATTTTTCTCTTTATTCATTTTAAGGGATTTGTGTCTTTTGTTTTgcattgttaggtattactgcactgatgGAGTACCAaatataagcatttcgctgcaactgtgataacatctgcaaaatatgagTATGTGgtcaatcaaatttgatttgattttgatttgatctcaAGGCATCCCTGACTTCAGaattgactgtctgactgacagtCTGTCCATCTTTCTGCCTGGCTTAACAGCTTAACACCCCAGGATGATGTCAATATCTGGTGAAGGCAGTTTTTCTGGGGACAAGCTGAATGAGCTCAGAAATACATCATCACCATTGAAACAGAGCCCACGAGTCCCTGGttctgtcagtctctctgctGCAGTCTCTCCAGATGTTTGCTACCTAGCGTAGCTGCATGTGTGCAATCTGTCCATGAGCTGCTCTGTCGATTAGCTGTATAGATCTGTTTGTTTGCTTTTAGCGAAGTGCATTCTGTATACTCTGTAGGGCCTGCGATGCTTTGTAGGAATTCAGAAATCGACCGATCTCTGAGACTGGGGCCAACCAGCTCTGTCTTTGACAGTCAGTCCAGCTGCTTAgttccactttctctctctattaGCGTTAGCGGCTCTCTATTAGTTCTGTCCATTGGGGCGTTCTGTCTGTTAGCTGCTTGCTTGATATGAACTTTACCCTTGTTGTTTACATCGTGTCTGACAGCTGTACACATTACACAATGTCCATTAGCTCTTAGCCATTAGCATTAGCCCCTAGCTCTGTCGGCTAGCTGTTAGCTGCATATGTTAACACTGGGCTCAGTCCGTGGCGGTGGAGCGATGCTCATTGACCCTGCCCGGTTCAGCATCGACATCTTGGTGATCCCCTCGCTGCCAACGGTGGAGAGCGGGAAATTCTCGTAGCTCTCTGGCGCCCCCAATCCACAGTGGCAGCGCTGCAGCTGGGCCTTCAACTCCCTCTGGAAGTTA

Function

NR:

description
neuropeptide Y receptor type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430335 True 1087 lncRNA 0.45 1 22067905 22068991

Neighbor

gene id symbol gene type direction distance location
LOC110523429 acty coding upstream 14801 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 67397 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 76979 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 109395 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 220668 21842068 ~ 21847237 (+)
LOC110523432 LOC106567996 coding downstream 121377 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 699674 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 805179 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 873214 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 996663 23065654 ~ 23158020 (+)
G378583 NA non-coding upstream 885 22066390 ~ 22067020 (+)
G378582 NA non-coding upstream 1693 22064967 ~ 22066212 (+)
G378579 NA non-coding upstream 7658 22059542 ~ 22060247 (+)
G378573 NA non-coding upstream 27265 22040391 ~ 22040640 (+)
G378571 NA non-coding upstream 28339 22039349 ~ 22039566 (+)
G378585 NA non-coding downstream 308 22069299 ~ 22069557 (+)
G378586 NA non-coding downstream 952 22069943 ~ 22070292 (+)
G378588 NA non-coding downstream 2308 22071299 ~ 22071529 (+)
G378590 NA non-coding downstream 3426 22072417 ~ 22104582 (+)
G378615 NA non-coding downstream 31503 22100494 ~ 22106353 (+)
LOC110523400 LOC106568542 other upstream 908986 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1231346 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1309404 20508074 ~ 20759255 (+)
G377022 NA other upstream 1471042 20591480 ~ 20596863 (+)
G376320 NA other upstream 2084057 19983261 ~ 19983848 (+)
G378660 NA other downstream 103544 22172535 ~ 22231920 (+)
G378832 NA other downstream 434761 22503752 ~ 22506270 (+)
G378868 NA other downstream 533119 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1554973 23623921 ~ 23678038 (+)

Expression


Co-expression Network