G378585



Basic Information


Item Value
gene id G378585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22069299 ~ 22069557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU430338
CCCCTCTCACTACcgctaccctaaccctaaccttcttgGAAAGAGAGGAAGGTAACTAGCACTACCACTCTCACTACTGCTCTCAACTTTCCGGACTGTTGGGACAGAGGGAAGACATGCTTTTCAAGAGCAAGAACAAGGACACGTCATCTTGTGTCCTGCTTTTAACCGGGAAACTACAATCAAAACTGGaccaaatgtgtaaaaaaaagagAGCCAACCACAGGCCCAGGACCCTAGAATAGAGATACAAAGGAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU430338 True 259 lncRNA 0.47 1 22069299 22069557

Neighbor


gene id symbol gene type direction distance location
LOC110523429 acty coding upstream 16195 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 68791 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 78373 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 110789 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 222062 21842068 ~ 21847237 (+)
LOC110523432 LOC106567996 coding downstream 120811 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 699108 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 804613 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 872648 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 996097 23065654 ~ 23158020 (+)
G378584 NA non-coding upstream 308 22067905 ~ 22068991 (+)
G378583 NA non-coding upstream 2279 22066390 ~ 22067020 (+)
G378582 NA non-coding upstream 3087 22064967 ~ 22066212 (+)
G378579 NA non-coding upstream 9052 22059542 ~ 22060247 (+)
G378573 NA non-coding upstream 28659 22040391 ~ 22040640 (+)
G378586 NA non-coding downstream 386 22069943 ~ 22070292 (+)
G378588 NA non-coding downstream 1742 22071299 ~ 22071529 (+)
G378590 NA non-coding downstream 2860 22072417 ~ 22104582 (+)
G378615 NA non-coding downstream 30937 22100494 ~ 22106353 (+)
G378630 NA non-coding downstream 59260 22128817 ~ 22151470 (+)
LOC110523400 LOC106568542 other upstream 910380 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1232740 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1310798 20508074 ~ 20759255 (+)
G377022 NA other upstream 1472436 20591480 ~ 20596863 (+)
G376320 NA other upstream 2085451 19983261 ~ 19983848 (+)
G378660 NA other downstream 102978 22172535 ~ 22231920 (+)
G378832 NA other downstream 434195 22503752 ~ 22506270 (+)
G378868 NA other downstream 532553 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1554407 23623921 ~ 23678038 (+)

Expression



Co-expression Network