G378588


Basic Information

Item Value
gene id G378588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22071299 ~ 22071529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430341
CAGTCAATCAAGTGGCTGCTAGCACAGTCATGAAAAGTGGCATGAGGGAAGtttttctaagtagtgagaaCACCAGGGAGCAGGCATTGTTGAAAAGTCATCTTTAGACATGTTGTGcttttcttaaatgtagttttgtaatcGACTTAAACAAGCAGACAACAAGAAAATTGTATTTGAAAAAGGTCAAGTTTTTGCTGTGAGCCAATGAGGTAACTACAGGTTATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430341 True 231 lncRNA 0.38 1 22071299 22071529

Neighbor

gene id symbol gene type direction distance location
LOC110523429 acty coding upstream 18195 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 70791 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 80373 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 112789 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 224062 21842068 ~ 21847237 (+)
LOC110523432 LOC106567996 coding downstream 118839 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 697136 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 802641 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 870676 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 994125 23065654 ~ 23158020 (+)
G378586 NA non-coding upstream 1007 22069943 ~ 22070292 (+)
G378585 NA non-coding upstream 1742 22069299 ~ 22069557 (+)
G378584 NA non-coding upstream 2308 22067905 ~ 22068991 (+)
G378583 NA non-coding upstream 4279 22066390 ~ 22067020 (+)
G378582 NA non-coding upstream 5087 22064967 ~ 22066212 (+)
G378590 NA non-coding downstream 888 22072417 ~ 22104582 (+)
G378615 NA non-coding downstream 28965 22100494 ~ 22106353 (+)
G378630 NA non-coding downstream 57288 22128817 ~ 22151470 (+)
G378653 NA non-coding downstream 88380 22159909 ~ 22160188 (+)
G378601 LOC106567986 non-coding downstream 108152 22179681 ~ 22180829 (+)
LOC110523400 LOC106568542 other upstream 912380 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1234740 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1312798 20508074 ~ 20759255 (+)
G377022 NA other upstream 1474436 20591480 ~ 20596863 (+)
G376320 NA other upstream 2087451 19983261 ~ 19983848 (+)
G378660 NA other downstream 101006 22172535 ~ 22231920 (+)
G378832 NA other downstream 432223 22503752 ~ 22506270 (+)
G378868 NA other downstream 530581 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1552435 23623921 ~ 23678038 (+)

Expression


Co-expression Network