G378590


Basic Information

Item Value
gene id G378590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22072417 ~ 22104582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430343
gttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcaatgggagaatgtgcaaagtagaaatacaaataatggggtgcaaaggagcaaaataaataaataaataaaatacagtagggaaagaggtagttgatagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430343 True 341 lncRNA 0.37 2 22072417 22104582

Neighbor

gene id symbol gene type direction distance location
LOC110523429 acty coding upstream 19313 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 71909 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 81491 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 113907 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 225180 21842068 ~ 21847237 (+)
LOC110523432 LOC106567996 coding downstream 85786 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 664083 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 769588 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 837623 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 961072 23065654 ~ 23158020 (+)
G378588 NA non-coding upstream 888 22071299 ~ 22071529 (+)
G378586 NA non-coding upstream 2125 22069943 ~ 22070292 (+)
G378585 NA non-coding upstream 2860 22069299 ~ 22069557 (+)
G378584 NA non-coding upstream 3426 22067905 ~ 22068991 (+)
G378583 NA non-coding upstream 5397 22066390 ~ 22067020 (+)
G378630 NA non-coding downstream 24235 22128817 ~ 22151470 (+)
G378653 NA non-coding downstream 55327 22159909 ~ 22160188 (+)
G378601 LOC106567986 non-coding downstream 75099 22179681 ~ 22180829 (+)
G378678 NA non-coding downstream 132869 22237451 ~ 22237915 (+)
G378682 NA non-coding downstream 136707 22241289 ~ 22241544 (+)
LOC110523400 LOC106568542 other upstream 913498 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1235858 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1313916 20508074 ~ 20759255 (+)
G377022 NA other upstream 1475554 20591480 ~ 20596863 (+)
G376320 NA other upstream 2088569 19983261 ~ 19983848 (+)
G378660 NA other downstream 67953 22172535 ~ 22231920 (+)
G378832 NA other downstream 399170 22503752 ~ 22506270 (+)
G378868 NA other downstream 497528 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1519382 23623921 ~ 23678038 (+)

Expression


Co-expression Network