G378615


Basic Information

Item Value
gene id G378615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22100494 ~ 22106353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430371
caggctagtaataggggtggcaacaattttggcagataattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctcattcagaacatcagctgagcagatttgggagaaggagaaatggggaaggcttgggcgagttgttgtggagggtgcagtgctgttgaccggggtaggagtagccaggtggaaagcatggccagccgtagaaaaatgcttattgaaattctcaattatggtggatttatcagtggtgacagtgtttcctatcttcagtgcagtgggcagctgggaggaggtgttcttattctcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430371 True 337 lncRNA 0.48 2 22100494 22106353

Neighbor

gene id symbol gene type direction distance location
LOC110523429 acty coding upstream 47390 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 99986 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 109568 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 141984 21954083 ~ 21958510 (+)
LOC110523423 LOC106568289 coding upstream 253257 21842068 ~ 21847237 (+)
LOC110523432 LOC106567996 coding downstream 84015 22190368 ~ 22221369 (+)
LOC110523445 LOC106568100 coding downstream 662312 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 767817 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 835852 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 959301 23065654 ~ 23158020 (+)
G378588 NA non-coding upstream 28965 22071299 ~ 22071529 (+)
G378586 NA non-coding upstream 30202 22069943 ~ 22070292 (+)
G378585 NA non-coding upstream 30937 22069299 ~ 22069557 (+)
G378584 NA non-coding upstream 31503 22067905 ~ 22068991 (+)
G378583 NA non-coding upstream 33474 22066390 ~ 22067020 (+)
G378630 NA non-coding downstream 22464 22128817 ~ 22151470 (+)
G378653 NA non-coding downstream 53556 22159909 ~ 22160188 (+)
G378601 LOC106567986 non-coding downstream 73328 22179681 ~ 22180829 (+)
G378678 NA non-coding downstream 131098 22237451 ~ 22237915 (+)
G378682 NA non-coding downstream 134936 22241289 ~ 22241544 (+)
LOC110523400 LOC106568542 other upstream 941575 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1263935 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1341993 20508074 ~ 20759255 (+)
G377022 NA other upstream 1503631 20591480 ~ 20596863 (+)
G376320 NA other upstream 2116646 19983261 ~ 19983848 (+)
G378660 NA other downstream 66182 22172535 ~ 22231920 (+)
G378832 NA other downstream 397399 22503752 ~ 22506270 (+)
G378868 NA other downstream 495757 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1517611 23623921 ~ 23678038 (+)

Expression


Co-expression Network