Item | Value |
---|---|
gene id | G378684 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 22242108 ~ 22242323 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU430449 | True | 216 | lncRNA | 0.40 | 1 | 22242108 | 22242323 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110523432 | LOC106567996 | coding | upstream | 20739 | 22190368 ~ 22221369 (+) |
LOC110523429 | acty | coding | upstream | 189004 | 22045971 ~ 22053104 (+) |
LOC100135946 | LOC100135946 | coding | upstream | 241600 | 21997656 ~ 22000508 (+) |
LOC110522824 | LOC106563065 | coding | upstream | 251182 | 21961475 ~ 21990926 (+) |
LOC110523424 | LOC106567937 | coding | upstream | 283598 | 21954083 ~ 21958510 (+) |
LOC110523445 | LOC106568100 | coding | downstream | 526342 | 22768665 ~ 22799421 (+) |
dmgdh | dmgdh | coding | downstream | 631847 | 22874170 ~ 22903435 (+) |
lhfpl2a | lhfpl2 | coding | downstream | 699882 | 22942205 ~ 23007315 (+) |
LOC110523451 | ap3b1 | coding | downstream | 823331 | 23065654 ~ 23158020 (+) |
tbca | tbca | coding | downstream | 951551 | 23193874 ~ 23203566 (+) |
G378683 | NA | non-coding | upstream | 143 | 22241634 ~ 22241965 (+) |
G378682 | NA | non-coding | upstream | 564 | 22241289 ~ 22241544 (+) |
G378678 | NA | non-coding | upstream | 4193 | 22237451 ~ 22237915 (+) |
G378601 | LOC106567986 | non-coding | upstream | 61279 | 22179681 ~ 22180829 (+) |
G378653 | NA | non-coding | upstream | 81920 | 22159909 ~ 22160188 (+) |
G378685 | NA | non-coding | downstream | 1314 | 22243637 ~ 22243875 (+) |
G378686 | NA | non-coding | downstream | 2454 | 22244777 ~ 22245327 (+) |
G378687 | NA | non-coding | downstream | 5587 | 22247910 ~ 22248113 (+) |
G378695 | NA | non-coding | downstream | 29424 | 22271747 ~ 22272208 (+) |
G378699 | NA | non-coding | downstream | 45014 | 22287337 ~ 22291508 (+) |
G378660 | NA | other | upstream | 10188 | 22172535 ~ 22231920 (+) |
LOC110523400 | LOC106568542 | other | upstream | 1083189 | 21108129 ~ 21160149 (+) |
LOC110522817 | LOC106568462 | other | upstream | 1405549 | 20831111 ~ 20842676 (+) |
LOC110522816 | LOC106568602 | other | upstream | 1483607 | 20508074 ~ 20759255 (+) |
G377022 | NA | other | upstream | 1645245 | 20591480 ~ 20596863 (+) |
G378832 | NA | other | downstream | 261429 | 22503752 ~ 22506270 (+) |
G378868 | NA | other | downstream | 359787 | 22602110 ~ 22629669 (+) |
LOC110522832 | LOC106567816 | other | downstream | 1381641 | 23623921 ~ 23678038 (+) |
G380340 | NA | other | downstream | 1498111 | 23740434 ~ 23741459 (+) |