Gene
RNA
| Item | Value |
|---|---|
| gene id | G378686 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22244777 ~ 22245327 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430451 | True | 551 | lncRNA | 0.43 | 1 | 22244777 | 22245327 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523432 | LOC106567996 | coding | upstream | 23408 | 22190368 ~ 22221369 (+) |
| LOC110523429 | acty | coding | upstream | 191673 | 22045971 ~ 22053104 (+) |
| LOC100135946 | LOC100135946 | coding | upstream | 244269 | 21997656 ~ 22000508 (+) |
| LOC110522824 | LOC106563065 | coding | upstream | 253851 | 21961475 ~ 21990926 (+) |
| LOC110523424 | LOC106567937 | coding | upstream | 286267 | 21954083 ~ 21958510 (+) |
| LOC110523445 | LOC106568100 | coding | downstream | 523338 | 22768665 ~ 22799421 (+) |
| dmgdh | dmgdh | coding | downstream | 628843 | 22874170 ~ 22903435 (+) |
| lhfpl2a | lhfpl2 | coding | downstream | 696878 | 22942205 ~ 23007315 (+) |
| LOC110523451 | ap3b1 | coding | downstream | 820327 | 23065654 ~ 23158020 (+) |
| tbca | tbca | coding | downstream | 948547 | 23193874 ~ 23203566 (+) |
| G378685 | NA | non-coding | upstream | 902 | 22243637 ~ 22243875 (+) |
| G378684 | NA | non-coding | upstream | 2454 | 22242108 ~ 22242323 (+) |
| G378683 | NA | non-coding | upstream | 2812 | 22241634 ~ 22241965 (+) |
| G378682 | NA | non-coding | upstream | 3233 | 22241289 ~ 22241544 (+) |
| G378678 | NA | non-coding | upstream | 6862 | 22237451 ~ 22237915 (+) |
| G378687 | NA | non-coding | downstream | 2583 | 22247910 ~ 22248113 (+) |
| G378695 | NA | non-coding | downstream | 26420 | 22271747 ~ 22272208 (+) |
| G378699 | NA | non-coding | downstream | 42010 | 22287337 ~ 22291508 (+) |
| G378780 | NA | non-coding | downstream | 180525 | 22425852 ~ 22498136 (+) |
| G378831 | NA | non-coding | downstream | 257867 | 22503194 ~ 22503634 (+) |
| G378660 | NA | other | upstream | 12857 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 1085858 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 1408218 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 1486276 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1647914 | 20591480 ~ 20596863 (+) |
| G378832 | NA | other | downstream | 258425 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 356783 | 22602110 ~ 22629669 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 1378637 | 23623921 ~ 23678038 (+) |
| G380340 | NA | other | downstream | 1495107 | 23740434 ~ 23741459 (+) |
