G378687


Basic Information

Item Value
gene id G378687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22247910 ~ 22248113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430452
tttttatttattttttatttattttacctttatttaaccaggcaagtcagttaagaacaaattcttattttcaatgacggcctgggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcgggggtttgaactcacaaccttccggttactagtccaacgctctaaccactaggctaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430452 True 204 lncRNA 0.41 1 22247910 22248113

Neighbor

gene id symbol gene type direction distance location
LOC110523432 LOC106567996 coding upstream 26541 22190368 ~ 22221369 (+)
LOC110523429 acty coding upstream 194806 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 247402 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 256984 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 289400 21954083 ~ 21958510 (+)
LOC110523445 LOC106568100 coding downstream 520552 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 626057 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 694092 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 817541 23065654 ~ 23158020 (+)
tbca tbca coding downstream 945761 23193874 ~ 23203566 (+)
G378686 NA non-coding upstream 2583 22244777 ~ 22245327 (+)
G378685 NA non-coding upstream 4035 22243637 ~ 22243875 (+)
G378684 NA non-coding upstream 5587 22242108 ~ 22242323 (+)
G378683 NA non-coding upstream 5945 22241634 ~ 22241965 (+)
G378682 NA non-coding upstream 6366 22241289 ~ 22241544 (+)
G378695 NA non-coding downstream 23634 22271747 ~ 22272208 (+)
G378699 NA non-coding downstream 39224 22287337 ~ 22291508 (+)
G378780 NA non-coding downstream 177739 22425852 ~ 22498136 (+)
G378831 NA non-coding downstream 255081 22503194 ~ 22503634 (+)
G378863 NA non-coding downstream 321213 22569326 ~ 22576116 (+)
G378660 NA other upstream 15990 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 1088991 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1411351 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1489409 20508074 ~ 20759255 (+)
G377022 NA other upstream 1651047 20591480 ~ 20596863 (+)
G378832 NA other downstream 255639 22503752 ~ 22506270 (+)
G378868 NA other downstream 353997 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1375851 23623921 ~ 23678038 (+)
G380340 NA other downstream 1492321 23740434 ~ 23741459 (+)

Expression


Co-expression Network