Gene
RNA
| Item | Value |
|---|---|
| gene id | G378695 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22271747 ~ 22272208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430463 | True | 438 | lncRNA | 0.37 | 2 | 22271747 | 22272208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523432 | LOC106567996 | coding | upstream | 50378 | 22190368 ~ 22221369 (+) |
| LOC110523429 | acty | coding | upstream | 218643 | 22045971 ~ 22053104 (+) |
| LOC100135946 | LOC100135946 | coding | upstream | 271239 | 21997656 ~ 22000508 (+) |
| LOC110522824 | LOC106563065 | coding | upstream | 280821 | 21961475 ~ 21990926 (+) |
| LOC110523424 | LOC106567937 | coding | upstream | 313237 | 21954083 ~ 21958510 (+) |
| LOC110523445 | LOC106568100 | coding | downstream | 496457 | 22768665 ~ 22799421 (+) |
| dmgdh | dmgdh | coding | downstream | 601962 | 22874170 ~ 22903435 (+) |
| lhfpl2a | lhfpl2 | coding | downstream | 669997 | 22942205 ~ 23007315 (+) |
| LOC110523451 | ap3b1 | coding | downstream | 793446 | 23065654 ~ 23158020 (+) |
| tbca | tbca | coding | downstream | 921666 | 23193874 ~ 23203566 (+) |
| G378687 | NA | non-coding | upstream | 23634 | 22247910 ~ 22248113 (+) |
| G378686 | NA | non-coding | upstream | 26420 | 22244777 ~ 22245327 (+) |
| G378685 | NA | non-coding | upstream | 27872 | 22243637 ~ 22243875 (+) |
| G378684 | NA | non-coding | upstream | 29424 | 22242108 ~ 22242323 (+) |
| G378683 | NA | non-coding | upstream | 29782 | 22241634 ~ 22241965 (+) |
| G378699 | NA | non-coding | downstream | 15129 | 22287337 ~ 22291508 (+) |
| G378780 | NA | non-coding | downstream | 153644 | 22425852 ~ 22498136 (+) |
| G378831 | NA | non-coding | downstream | 230986 | 22503194 ~ 22503634 (+) |
| G378863 | NA | non-coding | downstream | 297118 | 22569326 ~ 22576116 (+) |
| G378908 | NA | non-coding | downstream | 385111 | 22657319 ~ 22721825 (+) |
| G378660 | NA | other | upstream | 39827 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 1112828 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 1435188 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 1513246 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1674884 | 20591480 ~ 20596863 (+) |
| G378832 | NA | other | downstream | 231544 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 329902 | 22602110 ~ 22629669 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 1351756 | 23623921 ~ 23678038 (+) |
| G380340 | NA | other | downstream | 1468226 | 23740434 ~ 23741459 (+) |
