G378831



Basic Information


Item Value
gene id G378831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22503194 ~ 22503634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU430623
ACACCAACAAACATGTCACTTACAGCTCTAGAACAACAACAACCAAGTTCACTTACAGCTCTTGAACACCAACAAACATGTCACTTACATCTCTAGAACACCAACAACCATGTTCACTTACAGCTCTAGAACACCAACAAACATGTCACTTACAGCTCTAGAACACCAACAACCATGTTCACTTACATCTCTAGAACACCAACAAACATGTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU430623 True 213 lncRNA 0.40 2 22503194 22503634

Neighbor


gene id symbol gene type direction distance location
LOC110523432 LOC106567996 coding upstream 281825 22190368 ~ 22221369 (+)
LOC110523429 acty coding upstream 450090 22045971 ~ 22053104 (+)
LOC100135946 LOC100135946 coding upstream 502686 21997656 ~ 22000508 (+)
LOC110522824 LOC106563065 coding upstream 512268 21961475 ~ 21990926 (+)
LOC110523424 LOC106567937 coding upstream 544684 21954083 ~ 21958510 (+)
LOC110523445 LOC106568100 coding downstream 265031 22768665 ~ 22799421 (+)
dmgdh dmgdh coding downstream 370536 22874170 ~ 22903435 (+)
lhfpl2a lhfpl2 coding downstream 438571 22942205 ~ 23007315 (+)
LOC110523451 ap3b1 coding downstream 562020 23065654 ~ 23158020 (+)
tbca tbca coding downstream 690240 23193874 ~ 23203566 (+)
G378780 NA non-coding upstream 5058 22425852 ~ 22498136 (+)
G378699 NA non-coding upstream 211686 22287337 ~ 22291508 (+)
G378695 NA non-coding upstream 230986 22271747 ~ 22272208 (+)
G378687 NA non-coding upstream 255081 22247910 ~ 22248113 (+)
G378686 NA non-coding upstream 257867 22244777 ~ 22245327 (+)
G378863 NA non-coding downstream 65692 22569326 ~ 22576116 (+)
G378908 NA non-coding downstream 153685 22657319 ~ 22721825 (+)
G378914 NA non-coding downstream 222031 22725665 ~ 22727355 (+)
G378959 NA non-coding downstream 242094 22745728 ~ 22745956 (+)
G378962 NA non-coding downstream 246948 22750582 ~ 22750805 (+)
G378660 NA other upstream 271274 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 1344275 21108129 ~ 21160149 (+)
LOC110522817 LOC106568462 other upstream 1666635 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 1744693 20508074 ~ 20759255 (+)
G377022 NA other upstream 1906331 20591480 ~ 20596863 (+)
G378832 NA other downstream 118 22503752 ~ 22506270 (+)
G378868 NA other downstream 98476 22602110 ~ 22629669 (+)
LOC110522832 LOC106567816 other downstream 1120330 23623921 ~ 23678038 (+)
G380340 NA other downstream 1236800 23740434 ~ 23741459 (+)

Expression



Co-expression Network