Gene
RNA
| Item | Value |
|---|---|
| gene id | G378959 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22745728 ~ 22745956 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430766 | True | 229 | lncRNA | 0.38 | 1 | 22745728 | 22745956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523432 | LOC106567996 | coding | upstream | 524359 | 22190368 ~ 22221369 (+) |
| LOC110523429 | acty | coding | upstream | 692624 | 22045971 ~ 22053104 (+) |
| LOC100135946 | LOC100135946 | coding | upstream | 745220 | 21997656 ~ 22000508 (+) |
| LOC110522824 | LOC106563065 | coding | upstream | 754802 | 21961475 ~ 21990926 (+) |
| LOC110523424 | LOC106567937 | coding | upstream | 787218 | 21954083 ~ 21958510 (+) |
| LOC110523445 | LOC106568100 | coding | downstream | 22709 | 22768665 ~ 22799421 (+) |
| dmgdh | dmgdh | coding | downstream | 128214 | 22874170 ~ 22903435 (+) |
| lhfpl2a | lhfpl2 | coding | downstream | 196249 | 22942205 ~ 23007315 (+) |
| LOC110523451 | ap3b1 | coding | downstream | 319698 | 23065654 ~ 23158020 (+) |
| tbca | tbca | coding | downstream | 447918 | 23193874 ~ 23203566 (+) |
| G378914 | NA | non-coding | upstream | 18373 | 22725665 ~ 22727355 (+) |
| G378908 | NA | non-coding | upstream | 23903 | 22657319 ~ 22721825 (+) |
| G378863 | NA | non-coding | upstream | 169612 | 22569326 ~ 22576116 (+) |
| G378831 | NA | non-coding | upstream | 242094 | 22503194 ~ 22503634 (+) |
| G378780 | NA | non-coding | upstream | 247592 | 22425852 ~ 22498136 (+) |
| G378962 | NA | non-coding | downstream | 4626 | 22750582 ~ 22750805 (+) |
| G378912 | LOC106568093 | non-coding | downstream | 53747 | 22799703 ~ 22801978 (+) |
| G379021 | NA | non-coding | downstream | 110113 | 22856069 ~ 22863242 (+) |
| G379066 | NA | non-coding | downstream | 203790 | 22949746 ~ 22951909 (+) |
| G379100 | NA | non-coding | downstream | 262120 | 23008076 ~ 23008349 (+) |
| G378868 | NA | other | upstream | 116059 | 22602110 ~ 22629669 (+) |
| G378832 | NA | other | upstream | 239458 | 22503752 ~ 22506270 (+) |
| G378660 | NA | other | upstream | 513808 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 1586809 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 1909169 | 20831111 ~ 20842676 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 878008 | 23623921 ~ 23678038 (+) |
| G380340 | NA | other | downstream | 994478 | 23740434 ~ 23741459 (+) |
| LOC110523468 | vamp5 | other | downstream | 1092568 | 23838502 ~ 23844345 (+) |
| G381239 | NA | other | downstream | 1941783 | 24687739 ~ 24776429 (+) |
