G379100


Basic Information

Item Value
gene id G379100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23008076 ~ 23008349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430939
TGTATGTCTGTGAACTTTGATTGATGAACGTTTCTTTGCTACCTGACAATTTTacgttttttactttttaattaccgttttatATTTTTCCCTCGCTCAACTATTTTCATTCAACATTTTCaccccggacgctttatctggacatggctCTACACGACCACCACCAGCCGATGCTAAGTAGTTACATTAAcattatgccttctaattgcggtcgctgtactcataatatacagtagATCGATCACCATATGGCGAGGATAGCCGTGCTGCAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430939 True 274 lncRNA 0.40 1 23008076 23008349

Neighbor

gene id symbol gene type direction distance location
lhfpl2a lhfpl2 coding upstream 761 22942205 ~ 23007315 (+)
dmgdh dmgdh coding upstream 104641 22874170 ~ 22903435 (+)
LOC110523445 LOC106568100 coding upstream 208655 22768665 ~ 22799421 (+)
LOC110523432 LOC106567996 coding upstream 786707 22190368 ~ 22221369 (+)
LOC110523429 acty coding upstream 954972 22045971 ~ 22053104 (+)
LOC110523451 ap3b1 coding downstream 57305 23065654 ~ 23158020 (+)
tbca tbca coding downstream 185525 23193874 ~ 23203566 (+)
LOC110523452 otp coding downstream 200384 23208733 ~ 23214815 (+)
wdr41 wdr41 coding downstream 229454 23237803 ~ 23251588 (+)
LOC110523456 crhbp coding downstream 362617 23370966 ~ 23391981 (+)
G379066 NA non-coding upstream 56167 22949746 ~ 22951909 (+)
G379021 NA non-coding upstream 144834 22856069 ~ 22863242 (+)
G378912 LOC106568093 non-coding upstream 206098 22799703 ~ 22801978 (+)
G378962 NA non-coding upstream 257271 22750582 ~ 22750805 (+)
G378959 NA non-coding upstream 262120 22745728 ~ 22745956 (+)
G379102 NA non-coding downstream 1012 23009361 ~ 23009598 (+)
G379104 NA non-coding downstream 2554 23010903 ~ 23011258 (+)
G379105 NA non-coding downstream 5129 23013478 ~ 23013715 (+)
G379111 NA non-coding downstream 12291 23020640 ~ 23020849 (+)
G379112 NA non-coding downstream 12526 23020875 ~ 23021099 (+)
G378868 NA other upstream 378407 22602110 ~ 22629669 (+)
G378832 NA other upstream 501806 22503752 ~ 22506270 (+)
G378660 NA other upstream 776156 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 1849157 21108129 ~ 21160149 (+)
LOC110522832 LOC106567816 other downstream 615615 23623921 ~ 23678038 (+)
G380340 NA other downstream 732085 23740434 ~ 23741459 (+)
LOC110523468 vamp5 other downstream 830175 23838502 ~ 23844345 (+)
G381239 NA other downstream 1679390 24687739 ~ 24776429 (+)
G382186 NA other downstream 2217093 25225442 ~ 25225730 (+)

Expression


Co-expression Network