Gene
RNA
| Item | Value |
|---|---|
| gene id | G379102 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23009361 ~ 23009598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU430941 | True | 238 | lncRNA | 0.46 | 1 | 23009361 | 23009598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl2a | lhfpl2 | coding | upstream | 2046 | 22942205 ~ 23007315 (+) |
| dmgdh | dmgdh | coding | upstream | 105926 | 22874170 ~ 22903435 (+) |
| LOC110523445 | LOC106568100 | coding | upstream | 209940 | 22768665 ~ 22799421 (+) |
| LOC110523432 | LOC106567996 | coding | upstream | 787992 | 22190368 ~ 22221369 (+) |
| LOC110523429 | acty | coding | upstream | 956257 | 22045971 ~ 22053104 (+) |
| LOC110523451 | ap3b1 | coding | downstream | 56056 | 23065654 ~ 23158020 (+) |
| tbca | tbca | coding | downstream | 184276 | 23193874 ~ 23203566 (+) |
| LOC110523452 | otp | coding | downstream | 199135 | 23208733 ~ 23214815 (+) |
| wdr41 | wdr41 | coding | downstream | 228205 | 23237803 ~ 23251588 (+) |
| LOC110523456 | crhbp | coding | downstream | 361368 | 23370966 ~ 23391981 (+) |
| G379100 | NA | non-coding | upstream | 1012 | 23008076 ~ 23008349 (+) |
| G379066 | NA | non-coding | upstream | 57452 | 22949746 ~ 22951909 (+) |
| G379021 | NA | non-coding | upstream | 146119 | 22856069 ~ 22863242 (+) |
| G378912 | LOC106568093 | non-coding | upstream | 207383 | 22799703 ~ 22801978 (+) |
| G378962 | NA | non-coding | upstream | 258556 | 22750582 ~ 22750805 (+) |
| G379104 | NA | non-coding | downstream | 1305 | 23010903 ~ 23011258 (+) |
| G379105 | NA | non-coding | downstream | 3880 | 23013478 ~ 23013715 (+) |
| G379111 | NA | non-coding | downstream | 11042 | 23020640 ~ 23020849 (+) |
| G379112 | NA | non-coding | downstream | 11277 | 23020875 ~ 23021099 (+) |
| G379113 | NA | non-coding | downstream | 11626 | 23021224 ~ 23023030 (+) |
| G378868 | NA | other | upstream | 379692 | 22602110 ~ 22629669 (+) |
| G378832 | NA | other | upstream | 503091 | 22503752 ~ 22506270 (+) |
| G378660 | NA | other | upstream | 777441 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 1850442 | 21108129 ~ 21160149 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 614366 | 23623921 ~ 23678038 (+) |
| G380340 | NA | other | downstream | 730836 | 23740434 ~ 23741459 (+) |
| LOC110523468 | vamp5 | other | downstream | 828926 | 23838502 ~ 23844345 (+) |
| G381239 | NA | other | downstream | 1678141 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 2215844 | 25225442 ~ 25225730 (+) |
