G379105


Basic Information

Item Value
gene id G379105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23013478 ~ 23013715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU430944
cttgggagtgcttaggcaagaggcccgcgggcatacatatacccgtagtatattcattgtctaggtacactaggtaagacctgggtggaccactccctgtattttggttagggcaccaggtggtgctaaattaggtaagtagtgggtaggcaggtaagataggagagggggggctttgagatttactttctttgctttggttccgtccagccccttttccccatattaccgtgtaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU430944 True 238 lncRNA 0.49 1 23013478 23013715

Neighbor

gene id symbol gene type direction distance location
lhfpl2a lhfpl2 coding upstream 6163 22942205 ~ 23007315 (+)
dmgdh dmgdh coding upstream 110043 22874170 ~ 22903435 (+)
LOC110523445 LOC106568100 coding upstream 214057 22768665 ~ 22799421 (+)
LOC110523432 LOC106567996 coding upstream 792109 22190368 ~ 22221369 (+)
LOC110523429 acty coding upstream 960374 22045971 ~ 22053104 (+)
LOC110523451 ap3b1 coding downstream 51939 23065654 ~ 23158020 (+)
tbca tbca coding downstream 180159 23193874 ~ 23203566 (+)
LOC110523452 otp coding downstream 195018 23208733 ~ 23214815 (+)
wdr41 wdr41 coding downstream 224088 23237803 ~ 23251588 (+)
LOC110523456 crhbp coding downstream 357251 23370966 ~ 23391981 (+)
G379104 NA non-coding upstream 2220 23010903 ~ 23011258 (+)
G379102 NA non-coding upstream 3880 23009361 ~ 23009598 (+)
G379100 NA non-coding upstream 5129 23008076 ~ 23008349 (+)
G379066 NA non-coding upstream 61569 22949746 ~ 22951909 (+)
G379021 NA non-coding upstream 150236 22856069 ~ 22863242 (+)
G379111 NA non-coding downstream 6925 23020640 ~ 23020849 (+)
G379112 NA non-coding downstream 7160 23020875 ~ 23021099 (+)
G379113 NA non-coding downstream 7509 23021224 ~ 23023030 (+)
G379114 NA non-coding downstream 9434 23023149 ~ 23023489 (+)
G379115 NA non-coding downstream 9869 23023584 ~ 23023813 (+)
G378868 NA other upstream 383809 22602110 ~ 22629669 (+)
G378832 NA other upstream 507208 22503752 ~ 22506270 (+)
G378660 NA other upstream 781558 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 1854559 21108129 ~ 21160149 (+)
LOC110522832 LOC106567816 other downstream 610249 23623921 ~ 23678038 (+)
G380340 NA other downstream 726719 23740434 ~ 23741459 (+)
LOC110523468 vamp5 other downstream 824809 23838502 ~ 23844345 (+)
G381239 NA other downstream 1674024 24687739 ~ 24776429 (+)
G382186 NA other downstream 2211727 25225442 ~ 25225730 (+)

Expression


Co-expression Network