Gene
RNA
| Item | Value |
|---|---|
| gene id | G379162 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23115685 ~ 23116029 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU431008 | True | 243 | lncRNA | 0.44 | 2 | 23115685 | 23116029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl2a | lhfpl2 | coding | upstream | 108370 | 22942205 ~ 23007315 (+) |
| dmgdh | dmgdh | coding | upstream | 212250 | 22874170 ~ 22903435 (+) |
| LOC110523445 | LOC106568100 | coding | upstream | 316264 | 22768665 ~ 22799421 (+) |
| LOC110523432 | LOC106567996 | coding | upstream | 894316 | 22190368 ~ 22221369 (+) |
| LOC110523429 | acty | coding | upstream | 1062581 | 22045971 ~ 22053104 (+) |
| tbca | tbca | coding | downstream | 77845 | 23193874 ~ 23203566 (+) |
| LOC110523452 | otp | coding | downstream | 92704 | 23208733 ~ 23214815 (+) |
| wdr41 | wdr41 | coding | downstream | 121774 | 23237803 ~ 23251588 (+) |
| LOC110523456 | crhbp | coding | downstream | 254937 | 23370966 ~ 23391981 (+) |
| LOC110522829 | LOC106567920 | coding | downstream | 305614 | 23421643 ~ 23422884 (+) |
| G379142 | NA | non-coding | upstream | 56938 | 23058519 ~ 23058747 (+) |
| G379139 | NA | non-coding | upstream | 61040 | 23054403 ~ 23054645 (+) |
| G379131 | NA | non-coding | upstream | 66994 | 23048456 ~ 23048691 (+) |
| G379115 | NA | non-coding | upstream | 91872 | 23023584 ~ 23023813 (+) |
| G379114 | NA | non-coding | upstream | 92196 | 23023149 ~ 23023489 (+) |
| G379202 | NA | non-coding | downstream | 87842 | 23203871 ~ 23204099 (+) |
| G379263 | NA | non-coding | downstream | 214339 | 23330368 ~ 23330594 (+) |
| G379273 | NA | non-coding | downstream | 235076 | 23351105 ~ 23351363 (+) |
| G379279 | aggf1 | non-coding | downstream | 239977 | 23356006 ~ 23356429 (+) |
| G379282 | NA | non-coding | downstream | 244195 | 23360224 ~ 23360688 (+) |
| G378868 | NA | other | upstream | 486016 | 22602110 ~ 22629669 (+) |
| G378832 | NA | other | upstream | 609415 | 22503752 ~ 22506270 (+) |
| G378660 | NA | other | upstream | 883765 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 1956766 | 21108129 ~ 21160149 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 507935 | 23623921 ~ 23678038 (+) |
| G380340 | NA | other | downstream | 624405 | 23740434 ~ 23741459 (+) |
| LOC110523468 | vamp5 | other | downstream | 722495 | 23838502 ~ 23844345 (+) |
| G381239 | NA | other | downstream | 1571710 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 2109413 | 25225442 ~ 25225730 (+) |
