Gene
RNA
| Item | Value |
|---|---|
| gene id | G380258 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23604518 ~ 23604732 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432256 | True | 215 | lncRNA | 0.47 | 1 | 23604518 | 23604732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522830 | f2rl2 | coding | upstream | 130306 | 23470988 ~ 23474212 (+) |
| LOC110522829 | LOC106567920 | coding | upstream | 181634 | 23421643 ~ 23422884 (+) |
| LOC110523456 | crhbp | coding | upstream | 212537 | 23370966 ~ 23391981 (+) |
| wdr41 | wdr41 | coding | upstream | 352930 | 23237803 ~ 23251588 (+) |
| LOC110523452 | otp | coding | upstream | 389703 | 23208733 ~ 23214815 (+) |
| LOC110522832 | LOC106567816 | coding | downstream | 19189 | 23623921 ~ 23678038 (+) |
| vatg1 | LOC106567829 | coding | downstream | 105111 | 23709843 ~ 23711877 (+) |
| LOC110523463 | copt1 | coding | downstream | 108348 | 23713080 ~ 23735468 (+) |
| LOC118964576 | NA | coding | downstream | 133972 | 23737834 ~ 23747312 (+) |
| LOC110523468 | vamp5 | coding | downstream | 233770 | 23838502 ~ 23844345 (+) |
| G379395 | NA | non-coding | upstream | 18430 | 23566477 ~ 23586088 (+) |
| G379392 | NA | non-coding | upstream | 36965 | 23560022 ~ 23567553 (+) |
| G379350 | NA | non-coding | upstream | 89304 | 23476480 ~ 23515214 (+) |
| G379333 | NA | non-coding | upstream | 91641 | 23456365 ~ 23512877 (+) |
| G379356 | NA | non-coding | upstream | 112139 | 23490079 ~ 23492379 (+) |
| G380277 | NA | non-coding | downstream | 11125 | 23615857 ~ 23616253 (+) |
| G380279 | NA | non-coding | downstream | 12894 | 23617626 ~ 23618216 (+) |
| G380357 | NA | non-coding | downstream | 148489 | 23753221 ~ 23753477 (+) |
| G380363 | NA | non-coding | downstream | 157289 | 23762021 ~ 23762408 (+) |
| lhfpl2a | lhfpl2 | other | upstream | 597231 | 22942205 ~ 23007315 (+) |
| G378868 | NA | other | upstream | 974849 | 22602110 ~ 22629669 (+) |
| G378832 | NA | other | upstream | 1098248 | 22503752 ~ 22506270 (+) |
| G378660 | NA | other | upstream | 1372598 | 22172535 ~ 22231920 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 2445599 | 21108129 ~ 21160149 (+) |
| G380340 | NA | other | downstream | 135702 | 23740434 ~ 23741459 (+) |
| G381239 | NA | other | downstream | 1083007 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 1620710 | 25225442 ~ 25225730 (+) |
