G380340


Basic Information

Item Value
gene id G380340
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23740434 ~ 23741459 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU432349
gtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgtgttataccctttgttggcaatgacagaggtcaaatgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcagcaCGGACTtgcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagccactcctttgttgccctgacggtgtgtttgggatcattgtcatgctgaaagactcacccatcttcaatgcccttgctgatggaggttttcactcaaattctcacgatacatggccccattcattctttcctttacatggatcagtcgtcctggtccctttgcagaaaacagcccgaaagcatgatgtttccacccccatgcttcacagtaggtatggtgttctttggatgcaactcagcattctttgtcctccaaacatgacaagttgagtttttaccaaaatgttctattttggtttcatctgaccatatgacattctcccaatcttcttctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcagggggacacgtctggcattgcaggatttgagtccctggcagtgtagtgtgttactgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtctccccgtgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataatttctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtccttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU432349 True 1026 TUCP 0.46 1 23740434 23741459

Neighbor

gene id symbol gene type direction distance location
LOC110523463 copt1 coding upstream 4966 23713080 ~ 23735468 (+)
vatg1 LOC106567829 coding upstream 28557 23709843 ~ 23711877 (+)
LOC110522832 LOC106567816 coding upstream 62396 23623921 ~ 23678038 (+)
LOC110522830 f2rl2 coding upstream 266222 23470988 ~ 23474212 (+)
LOC110522829 LOC106567920 coding upstream 317550 23421643 ~ 23422884 (+)
LOC110523468 vamp5 coding downstream 97043 23838502 ~ 23844345 (+)
stard4 stard4 coding downstream 106759 23848218 ~ 23853553 (+)
marveld2a mald2 coding downstream 119692 23861151 ~ 23872777 (+)
oclna ocln coding downstream 132145 23873604 ~ 23883341 (+)
LOC110523472 gramd3 coding downstream 154615 23896074 ~ 23906001 (+)
G380279 NA non-coding upstream 122218 23617626 ~ 23618216 (+)
G380277 NA non-coding upstream 124181 23615857 ~ 23616253 (+)
G380258 NA non-coding upstream 135702 23604518 ~ 23604732 (+)
G379395 NA non-coding upstream 154346 23566477 ~ 23586088 (+)
G379392 NA non-coding upstream 172881 23560022 ~ 23567553 (+)
G380357 NA non-coding downstream 11762 23753221 ~ 23753477 (+)
G380363 NA non-coding downstream 20562 23762021 ~ 23762408 (+)
G380365 NA non-coding downstream 21844 23763303 ~ 23763523 (+)
G380336 NA non-coding downstream 22320 23763779 ~ 23765844 (+)
G380372 NA non-coding downstream 65755 23807214 ~ 23807936 (+)
lhfpl2a lhfpl2 other upstream 733147 22942205 ~ 23007315 (+)
G378868 NA other upstream 1110765 22602110 ~ 22629669 (+)
G378832 NA other upstream 1234164 22503752 ~ 22506270 (+)
G378660 NA other upstream 1508514 22172535 ~ 22231920 (+)
G381239 NA other downstream 946280 24687739 ~ 24776429 (+)
G382186 NA other downstream 1483983 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 2433486 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2696160 26437517 ~ 26502284 (+)

Expression


Co-expression Network