Gene
RNA
| Item | Value |
|---|---|
| gene id | G380372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23807214 ~ 23807936 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432387 | True | 723 | lncRNA | 0.36 | 1 | 23807214 | 23807936 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964576 | NA | coding | upstream | 59902 | 23737834 ~ 23747312 (+) |
| LOC110523463 | copt1 | coding | upstream | 71746 | 23713080 ~ 23735468 (+) |
| vatg1 | LOC106567829 | coding | upstream | 95337 | 23709843 ~ 23711877 (+) |
| LOC110522832 | LOC106567816 | coding | upstream | 129176 | 23623921 ~ 23678038 (+) |
| LOC110522830 | f2rl2 | coding | upstream | 333002 | 23470988 ~ 23474212 (+) |
| LOC110523468 | vamp5 | coding | downstream | 30566 | 23838502 ~ 23844345 (+) |
| stard4 | stard4 | coding | downstream | 40282 | 23848218 ~ 23853553 (+) |
| marveld2a | mald2 | coding | downstream | 53215 | 23861151 ~ 23872777 (+) |
| oclna | ocln | coding | downstream | 65668 | 23873604 ~ 23883341 (+) |
| LOC110523472 | gramd3 | coding | downstream | 88138 | 23896074 ~ 23906001 (+) |
| G380336 | NA | non-coding | upstream | 41370 | 23763779 ~ 23765844 (+) |
| G380365 | NA | non-coding | upstream | 43691 | 23763303 ~ 23763523 (+) |
| G380363 | NA | non-coding | upstream | 44806 | 23762021 ~ 23762408 (+) |
| G380357 | NA | non-coding | upstream | 53737 | 23753221 ~ 23753477 (+) |
| G380431 | NA | non-coding | downstream | 140657 | 23948593 ~ 23948796 (+) |
| G380433 | NA | non-coding | downstream | 145123 | 23953059 ~ 23953354 (+) |
| G380434 | NA | non-coding | downstream | 146286 | 23954222 ~ 23982341 (+) |
| G380457 | NA | non-coding | downstream | 174515 | 23982451 ~ 23982673 (+) |
| G380461 | NA | non-coding | downstream | 184143 | 23992079 ~ 23992280 (+) |
| G380340 | NA | other | upstream | 65755 | 23740434 ~ 23741459 (+) |
| lhfpl2a | lhfpl2 | other | upstream | 799927 | 22942205 ~ 23007315 (+) |
| G378868 | NA | other | upstream | 1177545 | 22602110 ~ 22629669 (+) |
| G378832 | NA | other | upstream | 1300944 | 22503752 ~ 22506270 (+) |
| G381239 | NA | other | downstream | 879803 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 1417506 | 25225442 ~ 25225730 (+) |
| LOC110523503 | NA | other | downstream | 2367009 | 26174884 ~ 26186710 (+) |
| LOC110522865 | LOC106567246 | other | downstream | 2629683 | 26437517 ~ 26502284 (+) |
