Gene
RNA
| Item | Value |
|---|---|
| gene id | G380905 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 24214786 ~ 24215037 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432958 | True | 252 | lncRNA | 0.40 | 1 | 24214786 | 24215037 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000000846 | LOC106567724 | coding | upstream | 132832 | 24040145 ~ 24081954 (+) |
| LOC110523473 | LOC106567744 | coding | upstream | 285121 | 23906231 ~ 23929665 (+) |
| LOC110523472 | gramd3 | coding | upstream | 308785 | 23896074 ~ 23906001 (+) |
| oclna | ocln | coding | upstream | 331445 | 23873604 ~ 23883341 (+) |
| marveld2a | mald2 | coding | upstream | 342009 | 23861151 ~ 23872777 (+) |
| LOC110523479 | srek1 | coding | downstream | 239035 | 24432802 ~ 24528819 (+) |
| LOC110523483 | LOC106567618 | coding | downstream | 420666 | 24635703 ~ 24644012 (+) |
| trnaa-ugc-9 | NA | coding | downstream | 489678 | 24704715 ~ 24704786 (+) |
| trnaa-ugc-10 | NA | coding | downstream | 504323 | 24719360 ~ 24719431 (+) |
| aqp3b | LOC106567539 | coding | downstream | 1204668 | 25419705 ~ 25424226 (+) |
| G380524 | NA | non-coding | upstream | 93060 | 24120867 ~ 24121726 (+) |
| G380482 | NA | non-coding | upstream | 184413 | 24030133 ~ 24030373 (+) |
| G380481 | NA | non-coding | upstream | 185210 | 24028976 ~ 24029576 (+) |
| G380477 | NA | non-coding | upstream | 190528 | 24023593 ~ 24024258 (+) |
| G380461 | NA | non-coding | upstream | 222506 | 23992079 ~ 23992280 (+) |
| G380930 | NA | non-coding | downstream | 15115 | 24230152 ~ 24230422 (+) |
| G380946 | NA | non-coding | downstream | 26568 | 24241605 ~ 24241809 (+) |
| G381009 | NA | non-coding | downstream | 109319 | 24324356 ~ 24324600 (+) |
| G381019 | NA | non-coding | downstream | 118498 | 24333535 ~ 24333734 (+) |
| G381045 | NA | non-coding | downstream | 151802 | 24366839 ~ 24367046 (+) |
| LOC110523468 | vamp5 | other | upstream | 370441 | 23838502 ~ 23844345 (+) |
| G380340 | NA | other | upstream | 473327 | 23740434 ~ 23741459 (+) |
| LOC110522832 | LOC106567816 | other | upstream | 577695 | 23623921 ~ 23678038 (+) |
| lhfpl2a | lhfpl2 | other | upstream | 1207499 | 22942205 ~ 23007315 (+) |
| G378868 | NA | other | upstream | 1585117 | 22602110 ~ 22629669 (+) |
| G381239 | NA | other | downstream | 472702 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 1010405 | 25225442 ~ 25225730 (+) |
| LOC110523503 | NA | other | downstream | 1959908 | 26174884 ~ 26186710 (+) |
| LOC110522865 | LOC106567246 | other | downstream | 2222582 | 26437517 ~ 26502284 (+) |
| G383794 | LOC106566282 | other | downstream | 2446801 | 26661838 ~ 26663613 (+) |
