Gene
RNA
| Item | Value |
|---|---|
| gene id | G380946 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 24241605 ~ 24241809 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Zinc finger protein Gfi-1b |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432999 | True | 205 | lncRNA | 0.38 | 1 | 24241605 | 24241809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000000846 | LOC106567724 | coding | upstream | 159651 | 24040145 ~ 24081954 (+) |
| LOC110523473 | LOC106567744 | coding | upstream | 311940 | 23906231 ~ 23929665 (+) |
| LOC110523472 | gramd3 | coding | upstream | 335604 | 23896074 ~ 23906001 (+) |
| oclna | ocln | coding | upstream | 358264 | 23873604 ~ 23883341 (+) |
| marveld2a | mald2 | coding | upstream | 368828 | 23861151 ~ 23872777 (+) |
| LOC110523479 | srek1 | coding | downstream | 212263 | 24432802 ~ 24528819 (+) |
| LOC110523483 | LOC106567618 | coding | downstream | 393894 | 24635703 ~ 24644012 (+) |
| trnaa-ugc-9 | NA | coding | downstream | 462906 | 24704715 ~ 24704786 (+) |
| trnaa-ugc-10 | NA | coding | downstream | 477551 | 24719360 ~ 24719431 (+) |
| aqp3b | LOC106567539 | coding | downstream | 1177896 | 25419705 ~ 25424226 (+) |
| G380930 | NA | non-coding | upstream | 11183 | 24230152 ~ 24230422 (+) |
| G380905 | NA | non-coding | upstream | 26568 | 24214786 ~ 24215037 (+) |
| G380524 | NA | non-coding | upstream | 119879 | 24120867 ~ 24121726 (+) |
| G380482 | NA | non-coding | upstream | 211232 | 24030133 ~ 24030373 (+) |
| G380481 | NA | non-coding | upstream | 212029 | 24028976 ~ 24029576 (+) |
| G381009 | NA | non-coding | downstream | 82547 | 24324356 ~ 24324600 (+) |
| G381019 | NA | non-coding | downstream | 91726 | 24333535 ~ 24333734 (+) |
| G381045 | NA | non-coding | downstream | 125030 | 24366839 ~ 24367046 (+) |
| G381047 | NA | non-coding | downstream | 127648 | 24369457 ~ 24369735 (+) |
| G381048 | NA | non-coding | downstream | 128513 | 24370322 ~ 24370555 (+) |
| LOC110523468 | vamp5 | other | upstream | 397260 | 23838502 ~ 23844345 (+) |
| G380340 | NA | other | upstream | 500146 | 23740434 ~ 23741459 (+) |
| LOC110522832 | LOC106567816 | other | upstream | 604514 | 23623921 ~ 23678038 (+) |
| lhfpl2a | lhfpl2 | other | upstream | 1234318 | 22942205 ~ 23007315 (+) |
| G378868 | NA | other | upstream | 1611936 | 22602110 ~ 22629669 (+) |
| G381239 | NA | other | downstream | 445930 | 24687739 ~ 24776429 (+) |
| G382186 | NA | other | downstream | 983633 | 25225442 ~ 25225730 (+) |
| LOC110523503 | NA | other | downstream | 1933136 | 26174884 ~ 26186710 (+) |
| LOC110522865 | LOC106567246 | other | downstream | 2195810 | 26437517 ~ 26502284 (+) |
| G383794 | LOC106566282 | other | downstream | 2420029 | 26661838 ~ 26663613 (+) |
