G381009


Basic Information

Item Value
gene id G381009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24324356 ~ 24324600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433066
TCCTATATTCTGTCTATCCTTCTTGCCATGCTATACAGTATGCTGTCCATCCTTCTCATCCTCTATGCAGTCTATCCTTTCCATCACGTCATCATGACTGGTCCTGACATCGCAGGGTGTCCTCACAGCACACAATGTCACTGCAGGGCTACATTCATTTCCATATCTCCTCCATTCAAAACCATGTCATACTAGAAAATGTGCACCCTACATTTGTCATTCCTACCTGTGGATTTCCAACATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433066 True 245 lncRNA 0.44 1 24324356 24324600

Neighbor

gene id symbol gene type direction distance location
zmp:0000000846 LOC106567724 coding upstream 242402 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 394691 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 418355 23896074 ~ 23906001 (+)
oclna ocln coding upstream 441015 23873604 ~ 23883341 (+)
marveld2a mald2 coding upstream 451579 23861151 ~ 23872777 (+)
LOC110523479 srek1 coding downstream 129472 24432802 ~ 24528819 (+)
LOC110523483 LOC106567618 coding downstream 311103 24635703 ~ 24644012 (+)
trnaa-ugc-9 NA coding downstream 380115 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 394760 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 1095105 25419705 ~ 25424226 (+)
G380946 NA non-coding upstream 82547 24241605 ~ 24241809 (+)
G380930 NA non-coding upstream 93934 24230152 ~ 24230422 (+)
G380905 NA non-coding upstream 109319 24214786 ~ 24215037 (+)
G380524 NA non-coding upstream 202630 24120867 ~ 24121726 (+)
G380482 NA non-coding upstream 293983 24030133 ~ 24030373 (+)
G381019 NA non-coding downstream 8935 24333535 ~ 24333734 (+)
G381045 NA non-coding downstream 42239 24366839 ~ 24367046 (+)
G381047 NA non-coding downstream 44857 24369457 ~ 24369735 (+)
G381048 NA non-coding downstream 45722 24370322 ~ 24370555 (+)
G381050 NA non-coding downstream 47427 24372027 ~ 24372264 (+)
LOC110523468 vamp5 other upstream 480011 23838502 ~ 23844345 (+)
G380340 NA other upstream 582897 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 687265 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1317069 22942205 ~ 23007315 (+)
G378868 NA other upstream 1694687 22602110 ~ 22629669 (+)
G381239 NA other downstream 363139 24687739 ~ 24776429 (+)
G382186 NA other downstream 900842 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1850345 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2113019 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2337238 26661838 ~ 26663613 (+)

Expression


Co-expression Network