G381050


Basic Information

Item Value
gene id G381050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24372027 ~ 24372264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433107
CTCAACATGCACACAAATattcatacacacatacaaaaatGACCACGTAAACCGGCACACGCACAAATAAGCCACCCATGAGAAACAATAGATGAGAAGGCGGCTCCTATCTCAGCCCTGTGTAATGACTTTCTGTTTGTGCTGCATTGACCCTGGCCTCAGCAATCATTCATTTCAATCAGCCCTTGCTACATGGTGTCTGGGCTCCTGTTTACAGGGTCTGAGGAGAATCTAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433107 True 238 lncRNA 0.45 1 24372027 24372264

Neighbor

gene id symbol gene type direction distance location
zmp:0000000846 LOC106567724 coding upstream 290073 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 442362 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 466026 23896074 ~ 23906001 (+)
oclna ocln coding upstream 488686 23873604 ~ 23883341 (+)
marveld2a mald2 coding upstream 499250 23861151 ~ 23872777 (+)
LOC110523479 srek1 coding downstream 81808 24432802 ~ 24528819 (+)
LOC110523483 LOC106567618 coding downstream 263439 24635703 ~ 24644012 (+)
trnaa-ugc-9 NA coding downstream 332451 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 347096 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 1047441 25419705 ~ 25424226 (+)
G381048 NA non-coding upstream 1472 24370322 ~ 24370555 (+)
G381047 NA non-coding upstream 2292 24369457 ~ 24369735 (+)
G381045 NA non-coding upstream 4981 24366839 ~ 24367046 (+)
G381019 NA non-coding upstream 38293 24333535 ~ 24333734 (+)
G381009 NA non-coding upstream 47427 24324356 ~ 24324600 (+)
G381051 NA non-coding downstream 99 24372363 ~ 24372591 (+)
G381052 NA non-coding downstream 2921 24375185 ~ 24375530 (+)
G381057 NA non-coding downstream 11382 24383646 ~ 24383913 (+)
G381067 NA non-coding downstream 18004 24390268 ~ 24390699 (+)
G381069 NA non-coding downstream 20682 24392946 ~ 24393215 (+)
LOC110523468 vamp5 other upstream 527682 23838502 ~ 23844345 (+)
G380340 NA other upstream 630568 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 734936 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1364740 22942205 ~ 23007315 (+)
G378868 NA other upstream 1742358 22602110 ~ 22629669 (+)
G381239 NA other downstream 315475 24687739 ~ 24776429 (+)
G382186 NA other downstream 853178 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1802681 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2065355 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2289574 26661838 ~ 26663613 (+)

Expression


Co-expression Network