G381067


Basic Information

Item Value
gene id G381067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24390268 ~ 24390699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433130
acaactctccttccgtggcctccaactgctcttaaatacaagtaaaactaaatgcatgctcttcaaccgattgctgcctgcacctgcccaccccgtccagcatcactactctggacggttcgggtttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctctttccagactcacattaaacatctccaatccaaaatgaaatctagaatcggcttcctatttcgcaacaaagcatccttcactcatgctgccaaacataccctcgtaaaactgaccatcctaccgatcctcgacttcagcgatgtcatttacaaaatagcctccaacactctactcaacaaattggatgcagtctatcacagtgccatccgttttgtcaccaaagccccatatactacccaccactgctacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433130 True 432 lncRNA 0.45 1 24390268 24390699

Neighbor

gene id symbol gene type direction distance location
zmp:0000000846 LOC106567724 coding upstream 308314 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 460603 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 484267 23896074 ~ 23906001 (+)
oclna ocln coding upstream 506927 23873604 ~ 23883341 (+)
marveld2a mald2 coding upstream 517491 23861151 ~ 23872777 (+)
LOC110523479 srek1 coding downstream 63373 24432802 ~ 24528819 (+)
LOC110523483 LOC106567618 coding downstream 245004 24635703 ~ 24644012 (+)
trnaa-ugc-9 NA coding downstream 314016 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 328661 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 1029006 25419705 ~ 25424226 (+)
G381057 NA non-coding upstream 6355 24383646 ~ 24383913 (+)
G381052 NA non-coding upstream 14738 24375185 ~ 24375530 (+)
G381051 NA non-coding upstream 17677 24372363 ~ 24372591 (+)
G381050 NA non-coding upstream 18004 24372027 ~ 24372264 (+)
G381048 NA non-coding upstream 19713 24370322 ~ 24370555 (+)
G381069 NA non-coding downstream 2247 24392946 ~ 24393215 (+)
G381071 NA non-coding downstream 5102 24395801 ~ 24396093 (+)
G381072 NA non-coding downstream 5540 24396239 ~ 24396493 (+)
G381115 NA non-coding downstream 74414 24465113 ~ 24500212 (+)
LOC110523468 vamp5 other upstream 545923 23838502 ~ 23844345 (+)
G380340 NA other upstream 648809 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 753177 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1382981 22942205 ~ 23007315 (+)
G378868 NA other upstream 1760599 22602110 ~ 22629669 (+)
G381239 NA other downstream 297040 24687739 ~ 24776429 (+)
G382186 NA other downstream 834743 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1784246 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2046920 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2271139 26661838 ~ 26663613 (+)

Expression


Co-expression Network