G381069


Basic Information

Item Value
gene id G381069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24392946 ~ 24393215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433132
caatttATCCCTTCTGGGAATGCCATAAAAGTCCCAAAAGTTATGGGTGGAGTTAGAAATTTGGCCTTCAGAAGTATTACAAAGCAAATATACTTCTAATCTATtggtctgcatatttcaagacatgcaTATGAGGGTGTAGTGAGATAACCGATGGGTTCGACGATACTTTTCTCGTCAATCATCttgaaaaaacatattttaaaactggaaatcaaccaaaTCAACAATGGAaagatcaaatgttttataatctaaatgttgaaagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433132 True 270 lncRNA 0.34 1 24392946 24393215

Neighbor

gene id symbol gene type direction distance location
zmp:0000000846 LOC106567724 coding upstream 310992 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 463281 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 486945 23896074 ~ 23906001 (+)
oclna ocln coding upstream 509605 23873604 ~ 23883341 (+)
marveld2a mald2 coding upstream 520169 23861151 ~ 23872777 (+)
LOC110523479 srek1 coding downstream 60857 24432802 ~ 24528819 (+)
LOC110523483 LOC106567618 coding downstream 242488 24635703 ~ 24644012 (+)
trnaa-ugc-9 NA coding downstream 311500 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 326145 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 1026490 25419705 ~ 25424226 (+)
G381067 NA non-coding upstream 2247 24390268 ~ 24390699 (+)
G381057 NA non-coding upstream 9033 24383646 ~ 24383913 (+)
G381052 NA non-coding upstream 17416 24375185 ~ 24375530 (+)
G381051 NA non-coding upstream 20355 24372363 ~ 24372591 (+)
G381050 NA non-coding upstream 20682 24372027 ~ 24372264 (+)
G381071 NA non-coding downstream 2586 24395801 ~ 24396093 (+)
G381072 NA non-coding downstream 3024 24396239 ~ 24396493 (+)
G381115 NA non-coding downstream 71898 24465113 ~ 24500212 (+)
G381104 NA non-coding downstream 114388 24507603 ~ 24510871 (+)
LOC110523468 vamp5 other upstream 548601 23838502 ~ 23844345 (+)
G380340 NA other upstream 651487 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 755855 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1385659 22942205 ~ 23007315 (+)
G378868 NA other upstream 1763277 22602110 ~ 22629669 (+)
G381239 NA other downstream 294524 24687739 ~ 24776429 (+)
G382186 NA other downstream 832227 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1781730 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2044404 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2268623 26661838 ~ 26663613 (+)

Expression


Co-expression Network