G381234


Basic Information

Item Value
gene id G381234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24679450 ~ 24679698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433311
TGAGAAGACAATGAGATAAGTCAAAAATGATTCCTTAGTTGTACATTTTCTTGAAATCTAAAGGCACTACCTAGATTCGATCCAATGTAATAAGTAGCTGAACATGCCATTACTCCAGCCTTGTGAAAATTACAAACTGACACGTTTACATttttgtgatttgatttgacggcTTGCACATGCGCAATTCGACGCGAGACGACCGTTAGACCCGATTACGTGTTTCTGCGCATTAGTTTAGCTAGCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433311 True 249 lncRNA 0.39 1 24679450 24679698

Neighbor

gene id symbol gene type direction distance location
LOC110523483 LOC106567618 coding upstream 35438 24635703 ~ 24644012 (+)
LOC110523479 srek1 coding upstream 205845 24432802 ~ 24528819 (+)
zmp:0000000846 LOC106567724 coding upstream 597496 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 749785 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 773449 23896074 ~ 23906001 (+)
trnaa-ugc-9 NA coding downstream 25017 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 39662 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 740007 25419705 ~ 25424226 (+)
LOC110523493 LOC106567525 coding downstream 794215 25473913 ~ 25482789 (+)
LOC110523494 NA coding downstream 849211 25528909 ~ 25561013 (+)
G381190 NA non-coding upstream 33580 24645017 ~ 24645870 (+)
G381191 NA non-coding upstream 34591 24644128 ~ 24644859 (+)
G381174 NA non-coding upstream 67011 24573470 ~ 24612439 (+)
G381305 NA non-coding downstream 137688 24817386 ~ 24888977 (+)
G381396 NA non-coding downstream 248511 24928209 ~ 24930197 (+)
G381505 NA non-coding downstream 403669 25083367 ~ 25124168 (+)
G382117 NA non-coding downstream 493777 25173475 ~ 25173703 (+)
G382118 NA non-coding downstream 494847 25174545 ~ 25174812 (+)
LOC110523468 vamp5 other upstream 835105 23838502 ~ 23844345 (+)
G380340 NA other upstream 937991 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 1042359 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1672163 22942205 ~ 23007315 (+)
G378868 NA other upstream 2049781 22602110 ~ 22629669 (+)
G381239 NA other downstream 8041 24687739 ~ 24776429 (+)
G382186 NA other downstream 545744 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1495247 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 1757921 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 1982140 26661838 ~ 26663613 (+)

Expression


Co-expression Network