Gene
RNA
| Item | Value |
|---|---|
| gene id | G381505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 25083367 ~ 25124168 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU433597 | True | 290 | lncRNA | 0.46 | 2 | 25083367 | 25124168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-10 | NA | coding | upstream | 363936 | 24719360 ~ 24719431 (+) |
| trnaa-ugc-9 | NA | coding | upstream | 378581 | 24704715 ~ 24704786 (+) |
| LOC110523483 | LOC106567618 | coding | upstream | 439355 | 24635703 ~ 24644012 (+) |
| LOC110523479 | srek1 | coding | upstream | 609762 | 24432802 ~ 24528819 (+) |
| zmp:0000000846 | LOC106567724 | coding | upstream | 1001413 | 24040145 ~ 24081954 (+) |
| aqp3b | LOC106567539 | coding | downstream | 295537 | 25419705 ~ 25424226 (+) |
| LOC110523493 | LOC106567525 | coding | downstream | 349745 | 25473913 ~ 25482789 (+) |
| LOC110523494 | NA | coding | downstream | 404741 | 25528909 ~ 25561013 (+) |
| cacna1b | cacna1b | coding | downstream | 548732 | 25672900 ~ 25793763 (+) |
| LOC110523500 | LOC106567252 | coding | downstream | 745575 | 25869743 ~ 25938520 (+) |
| G381396 | NA | non-coding | upstream | 153170 | 24928209 ~ 24930197 (+) |
| G381305 | NA | non-coding | upstream | 194390 | 24817386 ~ 24888977 (+) |
| G381234 | NA | non-coding | upstream | 403669 | 24679450 ~ 24679698 (+) |
| G381190 | NA | non-coding | upstream | 437497 | 24645017 ~ 24645870 (+) |
| G381191 | NA | non-coding | upstream | 438508 | 24644128 ~ 24644859 (+) |
| G382117 | NA | non-coding | downstream | 49307 | 25173475 ~ 25173703 (+) |
| G382118 | NA | non-coding | downstream | 50377 | 25174545 ~ 25174812 (+) |
| G382174 | NA | non-coding | downstream | 92945 | 25217113 ~ 25217367 (+) |
| G382194 | NA | non-coding | downstream | 106384 | 25230552 ~ 25230781 (+) |
| G382247 | NA | non-coding | downstream | 142484 | 25266652 ~ 25266860 (+) |
| G381239 | NA | other | upstream | 306938 | 24687739 ~ 24776429 (+) |
| LOC110523468 | vamp5 | other | upstream | 1239022 | 23838502 ~ 23844345 (+) |
| G380340 | NA | other | upstream | 1341908 | 23740434 ~ 23741459 (+) |
| LOC110522832 | LOC106567816 | other | upstream | 1446276 | 23623921 ~ 23678038 (+) |
| lhfpl2a | lhfpl2 | other | upstream | 2076080 | 22942205 ~ 23007315 (+) |
| G382186 | NA | other | downstream | 101274 | 25225442 ~ 25225730 (+) |
| LOC110523503 | NA | other | downstream | 1050777 | 26174884 ~ 26186710 (+) |
| LOC110522865 | LOC106567246 | other | downstream | 1313451 | 26437517 ~ 26502284 (+) |
| G383794 | LOC106566282 | other | downstream | 1537670 | 26661838 ~ 26663613 (+) |
| LOC110522888 | LOC106566402 | other | downstream | 2551184 | 27675352 ~ 27719165 (+) |
