G382174


Basic Information

Item Value
gene id G382174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 25217113 ~ 25217367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU434309
TTACAGAGTAGAGCAGTCTGGACCAAGATTGCATCTGCAGAGTCACAGACTGGGAGTGATTAAATTACTAAGGTACCGACTGTACGAAGTGTCATTTCTCCCATCACCTTTCCTGCATATGTCTGAATGCTTCATGACATTTGTCATTCcttttaattctctctctctcgctctctctcaaattcaagctgctttattggcatgaaaaacattgtgtcaatattgccaaagcaaaaatgtatacaatatacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU434309 True 255 lncRNA 0.39 1 25217113 25217367

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-10 NA coding upstream 497682 24719360 ~ 24719431 (+)
trnaa-ugc-9 NA coding upstream 512327 24704715 ~ 24704786 (+)
LOC110523483 LOC106567618 coding upstream 573101 24635703 ~ 24644012 (+)
LOC110523479 srek1 coding upstream 743508 24432802 ~ 24528819 (+)
zmp:0000000846 LOC106567724 coding upstream 1135159 24040145 ~ 24081954 (+)
aqp3b LOC106567539 coding downstream 202338 25419705 ~ 25424226 (+)
LOC110523493 LOC106567525 coding downstream 256546 25473913 ~ 25482789 (+)
LOC110523494 NA coding downstream 311542 25528909 ~ 25561013 (+)
cacna1b cacna1b coding downstream 455533 25672900 ~ 25793763 (+)
LOC110523500 LOC106567252 coding downstream 652376 25869743 ~ 25938520 (+)
G382118 NA non-coding upstream 42301 25174545 ~ 25174812 (+)
G382117 NA non-coding upstream 43410 25173475 ~ 25173703 (+)
G381505 NA non-coding upstream 92945 25083367 ~ 25124168 (+)
G381396 NA non-coding upstream 286916 24928209 ~ 24930197 (+)
G381305 NA non-coding upstream 328136 24817386 ~ 24888977 (+)
G382194 NA non-coding downstream 13185 25230552 ~ 25230781 (+)
G382247 NA non-coding downstream 49285 25266652 ~ 25266860 (+)
G382305 NA non-coding downstream 85612 25302979 ~ 25303211 (+)
G382307 NA non-coding downstream 87926 25305293 ~ 25305510 (+)
G382311 NA non-coding downstream 90607 25307974 ~ 25310280 (+)
G381239 NA other upstream 440684 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 1372768 23838502 ~ 23844345 (+)
G380340 NA other upstream 1475654 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 1580022 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 2209826 22942205 ~ 23007315 (+)
G382186 NA other downstream 8075 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 957578 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 1220252 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 1444471 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 2457985 27675352 ~ 27719165 (+)

Expression


Co-expression Network