G382247


Basic Information

Item Value
gene id G382247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 25266652 ~ 25266860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU434382
GCTTTATATTTTGACACCATCAGTTCTGTTCTAAAGTATCAGAACAAATTCCCTACATTCAAAGACACATGAGGAAAATGCAtggcaaaaaaatgtatttatgcaCTTCGTTTGGATTATATTCATTCCCATGAGTCATGCAATTGGTGTTATGATAAAACACTAACTGCATTATATGTCATAGCCCTACTCATTTACCATTATtagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU434382 True 209 lncRNA 0.33 1 25266652 25266860

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-10 NA coding upstream 547221 24719360 ~ 24719431 (+)
trnaa-ugc-9 NA coding upstream 561866 24704715 ~ 24704786 (+)
LOC110523483 LOC106567618 coding upstream 622640 24635703 ~ 24644012 (+)
LOC110523479 srek1 coding upstream 793047 24432802 ~ 24528819 (+)
zmp:0000000846 LOC106567724 coding upstream 1184698 24040145 ~ 24081954 (+)
aqp3b LOC106567539 coding downstream 152845 25419705 ~ 25424226 (+)
LOC110523493 LOC106567525 coding downstream 207053 25473913 ~ 25482789 (+)
LOC110523494 NA coding downstream 262049 25528909 ~ 25561013 (+)
cacna1b cacna1b coding downstream 406040 25672900 ~ 25793763 (+)
LOC110523500 LOC106567252 coding downstream 602883 25869743 ~ 25938520 (+)
G382194 NA non-coding upstream 35871 25230552 ~ 25230781 (+)
G382174 NA non-coding upstream 49285 25217113 ~ 25217367 (+)
G382118 NA non-coding upstream 91840 25174545 ~ 25174812 (+)
G382117 NA non-coding upstream 92949 25173475 ~ 25173703 (+)
G381505 NA non-coding upstream 142484 25083367 ~ 25124168 (+)
G382305 NA non-coding downstream 36119 25302979 ~ 25303211 (+)
G382307 NA non-coding downstream 38433 25305293 ~ 25305510 (+)
G382311 NA non-coding downstream 41114 25307974 ~ 25310280 (+)
G382315 NA non-coding downstream 44479 25311339 ~ 25311826 (+)
G382340 NA non-coding downstream 69687 25336547 ~ 25336887 (+)
G382186 NA other upstream 40922 25225442 ~ 25225730 (+)
G381239 NA other upstream 490223 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 1422307 23838502 ~ 23844345 (+)
G380340 NA other upstream 1525193 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 1629561 23623921 ~ 23678038 (+)
LOC110523503 NA other downstream 908085 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 1170759 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 1394978 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 2408492 27675352 ~ 27719165 (+)
G385053 NA other downstream 2439854 27706714 ~ 27707078 (+)

Expression


Co-expression Network